Gene Tpet_1288 details

Gene Information

• Locus tag: Tpet_1288
• ID: 5170650
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1298448
• End bp: 1298915
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640563813
• Product: 30S ribosomal protein S7
• Protein accession: YP_001244878
• Protein GI: 148270418
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000249604
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGTAGAA GGAGAGCTGA AATAAGACAG GTACCACCTG ATCCGGTGTA CGGAGATGTG 
CTTGTTGCAA AGTTGATAAA TAAAGTGATG TGGGATGGCA AAAAAACAAC CGCTCAGAAG 
ATCGTCTACG GTGCTTTCGA TATCATCAGA GAAAAGACAA AGAAAGATCC TCTTGAAGTT 
TTCAGGCAGG CTGTAGAAAA TGTGAAGCCT GTTCTTGAAG TAAGACCGCG AAGGGTTGGT 
GGTGCAACTT ACCAGGTTCC CATCGAAGTT CAGGAACCGA GGAGGACCTC TCTTGCTCTC 
AGATGGATAG TTGAAGCTGC AAGAGCCAGA AAAGGAAGGC CAATGAAAGA GAAGCTGGCC 
GAGGAGATCA TAGCAGCATA CAACAACACA GGTACGGCCA TTAAGAAGAA GGAAGACACT 
CACAGAATGG CGGAAGCCAA CAGGGCATTT GCTCATTACA GGTGGTGA 

 

Protein sequence

MRRRRAEIRQ VPPDPVYGDV LVAKLINKVM WDGKKTTAQK IVYGAFDIIR EKTKKDPLEV 
FRQAVENVKP VLEVRPRRVG GATYQVPIEV QEPRRTSLAL RWIVEAARAR KGRPMKEKLA 
EEIIAAYNNT GTAIKKKEDT HRMAEANRAF AHYRW