| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1280 |
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| Symbol | |
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| ID | 5171364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1291513 |
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| End bp | 1292808 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563805 |
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| Product | sun protein |
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| Protein accession | YP_001244870 |
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| Protein GI | 148270410 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000185655 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA ACGTAAGACT GCTCGCCTAC AGACTTCTGA GAAAGTACGA GAAGGAAAAA
TTCATATTGA GAGAGGACGT GGACAGCGTC CTCTCTTTTT TGGACGATAA AGATAGAAGA
TTCTTCAAAG AACTCGTGTG GGGAGTTGTG AGGAAAGAAG AGCTTCTGGA CTGGTACATA
AACCAACTTC TGAAGAAAAA AGACATCCCA CCCGCTGTCA GGGTTGCGTT GAGGATGGGG
GCTTATCAGC TCCTCTTCAT GAACAGTGTT CCAGATTACG CGGCGGTCAG CGAAACAGTA
AAACTGGTGA AGAACGAAAA CTTCAAAAAA CTGGTGAACG CCGTGCTGAG GAGATTGAGA
ACTGTTCCCG AACCAAAAGA GCTTCACCTC ATCTACTCAC ATCCGGAGTG GATCGTGAAC
TACTGGAGAT CTTTTCTTCC CGAAGAGGCA GTTTTGAGAA TTATGAAGTG GAACCAGGAA
CCTCTCCCTG TCATGCTCCG CGTGAATTCA CTTGCAACCA CTAAAGAGGA AGTCATCAAA
ATTCTCGCCG AAGAGGGCAC GGAGGCAGTT CCGGGGAAAC ACGCCCCGTT TTCTCTGGTT
GTAAGGAAAC TCGGAATTTC GATGAACGAC TCCAGAGTGA TAAAGGATGG ACTCGCAAGT
GTTCAGGGAG AGTCTTCACA ACTTGTGCCC TTTTTCATGG AACTGAAACC CGGACTGAGA
GTACTGGACA CCTGCGCGGC ACCGGGTGGC AAGACCACCG CTATCGCCGA ATTGGTGAAA
GACCAGGGAA AGATACTGGC CGTTGATATA AGCAGAGAGA AGACACAGCT TGTCGAAAAA
CACGCGAAAC GCCTGAAACT CTCTTCGATA GAGACAAAAA TCGCCGATGT CGAAAGACTC
ACAGAGTACG TACAGGACAC ATTCGACAGG ATTCTGGTGG ACGCTCCCTG TACTTCGCTG
GGTACGGCAA GAAACCATCC GGAGGTTTTG AGGAGAGTGA ACAAAGAGGA TTTCAAGAAG
TTCTCAGAAA TTCAGCTGAG GATGGTACAG CAGGCCTGGC AGCTTCTGGA AAAGGGTGGT
ATCCTCCTCT ACAGCACCTG TACTGTGACG AAAGAAGAAA ACACCGAAGT GGTGAAAAGA
TTCGTCTCCG AGAGGAAAGA CGTTGAAGTG ATCGATACCA GAGACAAAAT GAAAGAATTC
GAAGTGGAAG GAATCTGGGA TGGTTACGGC TTTCTGATGC TTCCTGACGA GACGATAACT
CCCTTCTATG TCTCCGTTCT CAGAAAGATG GGATGA
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| Protein sequence | MKTNVRLLAY RLLRKYEKEK FILREDVDSV LSFLDDKDRR FFKELVWGVV RKEELLDWYI
NQLLKKKDIP PAVRVALRMG AYQLLFMNSV PDYAAVSETV KLVKNENFKK LVNAVLRRLR
TVPEPKELHL IYSHPEWIVN YWRSFLPEEA VLRIMKWNQE PLPVMLRVNS LATTKEEVIK
ILAEEGTEAV PGKHAPFSLV VRKLGISMND SRVIKDGLAS VQGESSQLVP FFMELKPGLR
VLDTCAAPGG KTTAIAELVK DQGKILAVDI SREKTQLVEK HAKRLKLSSI ETKIADVERL
TEYVQDTFDR ILVDAPCTSL GTARNHPEVL RRVNKEDFKK FSEIQLRMVQ QAWQLLEKGG
ILLYSTCTVT KEENTEVVKR FVSERKDVEV IDTRDKMKEF EVEGIWDGYG FLMLPDETIT
PFYVSVLRKM G
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