| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1271 |
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| Symbol | |
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| ID | 5170825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1283756 |
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| End bp | 1284640 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640563796 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001244861 |
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| Protein GI | 148270401 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000148368 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGAG GAGTAGGAAC TGCTATCGTT ACACCATTCA AAAATGGTGA GCTTGATCTT
GAGTCTTACG AGAGGCTTGT CAGGTATCAG CTCGAAAACG GCGTCAACGC GCTGATCGTC
CTTGGAACGA CAGGTGAATC ACCAACCGTC AACGAAGACG AGAGAGAAAA GCTCGTTTCC
AGAACTCTCG AGATCGTCGA TGGGAAAATC CCTGTGATCG TGGGAGCGGG AACGAATTCC
ACCGAAAAAA CGCTGAAACT CGTCAAGCAG GCGGAAAAAC TCGGAGCAAA CGGAGTTCTT
GTGGTCACCC CGTATTACAA CAAGCCCACA CAGGAAGGAC TCTATCAGCA CTACAAGTAC
ATCTCTGAGA GAACGGATCT CGGGATCGTT GTTTACAACG TGCCCGGAAG AACCGGTGTG
AACGTTCTCC CGGAAACTGC TGCAAGGATC GCTGCGGACC TCAAGAACGT GGTGGGAATA
AAAGAGGCGA ACCCGGATAT AGACCAGATA GACAGGACGG TATCACTGAC AAAACAGGCA
AGAAGCGATT TCATGGTGTG GTCCGGCAAC GATGATAGAA CGTTCTATCT CCTCTGCGCG
GGTGGAGACG GCGTCATCTC TGTTGTGTCG AACGTGGCAC CGAAACAGAT GGTAGAACTC
TGCGCAGAGT ACTTCAGCGG AAACCTCGAA AAATCGAGGG AGGTTCACAG AAAACTCAGA
CCTCTCATGA AGGCGCTGTT TGCGGAAACG AATCCGATAC CAGTTAAAGC CGCTTTGAAT
CTCATGGGAT TCATCGAGAA CGAGCTGAGA CTACCACTCG TACCCGCCAG TGAAAAGACG
ATGGAACTTC TCAGGAACGT GCTCAAGGAG AGTGGATTGC TATGA
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| Protein sequence | MFRGVGTAIV TPFKNGELDL ESYERLVRYQ LENGVNALIV LGTTGESPTV NEDEREKLVS
RTLEIVDGKI PVIVGAGTNS TEKTLKLVKQ AEKLGANGVL VVTPYYNKPT QEGLYQHYKY
ISERTDLGIV VYNVPGRTGV NVLPETAARI AADLKNVVGI KEANPDIDQI DRTVSLTKQA
RSDFMVWSGN DDRTFYLLCA GGDGVISVVS NVAPKQMVEL CAEYFSGNLE KSREVHRKLR
PLMKALFAET NPIPVKAALN LMGFIENELR LPLVPASEKT MELLRNVLKE SGLL
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