Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1227 |
Symbol | |
ID | 5170153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1245176 |
End bp | 1246477 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563751 |
Product | signal recognition particle protein |
Protein accession | YP_001244817 |
Protein GI | 148270357 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000121808 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAGA ATCTTCAGGA GAAGCTGTCC AGAGTTTTCA AGAATCTGTC TGGACGCGGA AAGATCACAG AAAAGAATGT AAAAGACGCG ATCAGGGAAG TGAAACTTTC CCTGCTCGAA GCCGATGTCA ACTACAAAGT TGTGAAAGAA TTCGTGGACC ACGTCCTCCA GAAAGCTCTC GGAGAGGAAG TTCTCAGGAG TCTCACACCG GACCAGCAGT TCATAAAGAT AGTGAGAGAC GAGCTTGTAA GAATCATGGG AGAAAAGAAC GAACCATTGA GACTCGTCCA CAGACCAGCT CCCATAATGA TGGTGGGACT TCAGGGAAGT GGAAAGACCA CAACGTGTGC GAAACTCGCA AAACTCCTCA AAAAAGAGGG AAGGAATCCT TTGCTTGTCG CAGCGGATCT GTACCGTCCC GCAGCCGTTG ATCAGCTTGT GAAGCTTGGA AATCAGATTG GTATAAACGT TGTTCACGAT TACAACAAAA CACCCGTTGA GATAGTGAAA GAAGCTGTAG ACGTTGCTGA GAGTACAGGA AAAGATATTC TGATAGTGGA TACCGCTGGT CGACTTCACA TAGACGAAGA GATGATGAAA GAGCTGGAAG AGATAAAGAA AATCCTGAAC CCAGATGAGA TCCTGCTCGT CGTTGACGCG ATGATGGGGC AGGACGCAGT CAATACCGCC AAGGTGTTCG ATGAAAGGCT CGATTTAACA GGATTCGTCG TAACAAAGAT GGACGGAGAT GCAAGAGGCG GAGTCATTCT CTCCATAAAG TACGTGACGG GGAAGCCCGT CAAATTCATT GGAACGAGTG AAAAAATCGA CGGTCTGGAG CCGTTCCATC CAGACAGAAT CGCAAACCGA ATCCTGGGAA TGGGGGACGT TCTTTCACTG ATCGAAAAAG TGGAAAAGGA ACTCGATCAG GAAAAGATGA AGAAAAGCGC AGAAAAGTTC CTGAAGGCAG AGTTCACCCT GGAAGATTTC AAAGAACAGC TTCAGGAGAT GAAAAAACTC GGACCTCTTT CTTCCATTCT TGAGATGCTT CCAGGTGCAC CAAAGGTCGA TGTGGAGATG AGTGAAAAGG AGCTGAAAAA GATCGAGGCC ATCATAAATT CGATGACCAT AGAAGAGAGA AGAAATCCCG GTATAATAAA CGCCAGTAGA AAAAGGAGAA TTGCACGTGG AAGTGGAACC ACTGTCCAGG ATGTGAACAA ACTTCTCAAA AGCTATGAAC AGATGAAAGC TCTAATGAAG AGGATGAAAA AAGGTAGATT CAAAATACCA TTTGGATTCT GA
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Protein sequence | MFENLQEKLS RVFKNLSGRG KITEKNVKDA IREVKLSLLE ADVNYKVVKE FVDHVLQKAL GEEVLRSLTP DQQFIKIVRD ELVRIMGEKN EPLRLVHRPA PIMMVGLQGS GKTTTCAKLA KLLKKEGRNP LLVAADLYRP AAVDQLVKLG NQIGINVVHD YNKTPVEIVK EAVDVAESTG KDILIVDTAG RLHIDEEMMK ELEEIKKILN PDEILLVVDA MMGQDAVNTA KVFDERLDLT GFVVTKMDGD ARGGVILSIK YVTGKPVKFI GTSEKIDGLE PFHPDRIANR ILGMGDVLSL IEKVEKELDQ EKMKKSAEKF LKAEFTLEDF KEQLQEMKKL GPLSSILEML PGAPKVDVEM SEKELKKIEA IINSMTIEER RNPGIINASR KRRIARGSGT TVQDVNKLLK SYEQMKALMK RMKKGRFKIP FGF
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