Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1223 |
Symbol | trmD |
ID | 5171688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1243379 |
End bp | 1244116 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563747 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001244813 |
Protein GI | 148270353 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000134346 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATCA CAATAGTGAC TATATTCCCT GAAATGGTCG AAGTTATAAA GAAGTACGGC GTCATAGCTC GGGCGGTAGA AAGAGGTATC GTGGAGATAA ACGTGGAGAA TTTGAGGGAT TACACCACCG ACAGGCACAG AACGGTTGAC GATTATCAAT ACGGCGGCGG ATACGGCATG GTGATGAAAC CTGAACCTTT CTTCAGATTC TACGAAAGTT ACGTAGAAAA ATATGGAAAA CCTTACGTTA TTCTCACAAG TCCGCAGGGG AGAATTTTCA ACTACAAGAT AGCAGAAGAA CTTTCAAAGA AGGACGACAT CGTTATATTC TGTGGAAGGT ACGAGGGAAT AGATGAAAGA GTGATGAGCA TCGTTGACGA TGAAATATCC ATAGGAGACT ACATACTCAC GGGTGGAGAG CTCCCCGCCA TGGTCATAAC TGACGCTGTT GTGAGGCTTG TACCGGGTGT TGTCGAGAGA GAATCCGTAG AAAGAGAATC GTTTCATCAG GGACTACTCG ATCATCCCGT TTACACAAGG CCGTATGAGT ACAAGGGTAT GAAAGTTCCA GATGTTCTCC TCTCTGGAGA CCACGAAAAG GTGGAGCTCT GGAGAAGAAA GGAGAGCATA AAGAAAACAC TGGCAAAGAG GCCAGATCTT TTCTTAGCGA AGGAACTGGA CGAAATGGAC AAATTGGCTA TAATAGAGTT GTTCAGGGAG TTGATGGAAA AATGTTAG
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Protein sequence | MRITIVTIFP EMVEVIKKYG VIARAVERGI VEINVENLRD YTTDRHRTVD DYQYGGGYGM VMKPEPFFRF YESYVEKYGK PYVILTSPQG RIFNYKIAEE LSKKDDIVIF CGRYEGIDER VMSIVDDEIS IGDYILTGGE LPAMVITDAV VRLVPGVVER ESVERESFHQ GLLDHPVYTR PYEYKGMKVP DVLLSGDHEK VELWRRKESI KKTLAKRPDL FLAKELDEMD KLAIIELFRE LMEKC
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