Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1216 |
Symbol | |
ID | 5170971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1236827 |
End bp | 1237630 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563740 |
Product | hemolysin A |
Protein accession | YP_001244806 |
Protein GI | 148270346 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000350473 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATA AGAAGAGATT AGACCAGCTT GTTCTGGAAA GAGGACTCGT GGAGAGCAGG GAAAAAGCGA AGGTGTTGAT ACTGGCGGGG AAGGTTCTCG TGAACGGAGA AAGGGTTACA AAGGCCAGTA AACTCGTTCC AGAAGATGCC AATGTCGAAC TCCTGGAGGA GCCAAAGTAT GTGAGCAGAG GAGGGTACAA ACTCGAGTCT GCCTTCGAGA GCTTCAAAAT AGACGTTTCA GGGAAAGTCG CGTGCGACAT AGGAGCGTCC ACGGGGGGAT TCACGGATTT TCTTCTCCAG CGTGGAGCGA AGAAAGTGTA CGCTGTGGAT GTGGGGTACG GCCAGCTTCA TTGGAAATTG AGAAACGATC CTCGGGTTGT TGTGATGGAA AAGGTGAACG CTCGTTATTT AAATCCTGAT GATCTGGGAG AGAAAGTGGA TGTTGTAACC TGCGATGTGT CTTTCATCTC TTTGAAAAAG ATCATCCCTG CCATTTCCAG GATACTGAAG AACATCGGTG ATGCTGTTTT GCTCGTGAAG CCTCAGTTTG AAGCTCCAAG AAAATTCGTA AAAAAGGGTA TCGTAAAGGA TCCAGGTGTT CACCTTGAAG TGCTGGAGGA AATACGAAAG AGCCTGATCG AGAACGGTTT TGTTGTGAAA GGATGCTGTT TTTCAAAAAT CAAAGGAACG GAAGGGAACA TAGAGTACTT TTTCTGGGTC AAAAAGGAAG GAGAGAACGC TGAAATAGAC CTGAGAAAAA TCGTGGAAGA AGCCTGGAGG TTTTTTGGGG AGAGGGAAAG ATGA
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Protein sequence | MADKKRLDQL VLERGLVESR EKAKVLILAG KVLVNGERVT KASKLVPEDA NVELLEEPKY VSRGGYKLES AFESFKIDVS GKVACDIGAS TGGFTDFLLQ RGAKKVYAVD VGYGQLHWKL RNDPRVVVME KVNARYLNPD DLGEKVDVVT CDVSFISLKK IIPAISRILK NIGDAVLLVK PQFEAPRKFV KKGIVKDPGV HLEVLEEIRK SLIENGFVVK GCCFSKIKGT EGNIEYFFWV KKEGENAEID LRKIVEEAWR FFGERER
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