Gene Tpet_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1204 
Symbol 
ID5170296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1224551 
End bp1225096 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content40% 
IMG OID640563728 
Productdiguanylate cyclase 
Protein accessionYP_001244794 
Protein GI148270334 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.20024e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTACCT TTTTTGGCGT AACAAAAATC TTCAAGAGAT TAAAAGAAAT AGCCATAAAA 
GACTATCTCA CAGGACTTTA CACGAGGTAC TACTTCTTTG AGGAGTGGCT CCCAATGGAA
ATGGAAAGGC AAAAAAGAAA GAATGGAAAA GGCATCTCCT TTCTCATCAT CGATCTGGAT
GATTTCAAAA CCATCAACGA TAAGTATTCT CATAGAATGG GCGACAAACT TTTGAAGTAC
GTTGCAAGTG AGATCATCAA AAACATCAGG AAAACCGATT GTGCGGTTAG ATTCGGCGGA
GACGAAATTC TTATTGCTTT CCCGGATACC GACAAAAAAA CTGTTGAAAA CATTGTGAAA
AGACTTGAGA AAAAATTAAT TTTCAACCCT GTGGGCCTTC CAATAGAATT TTCTTATGGA
ATAGAGACCT GGAAACCCGG TGAAAACGTG GAAGGAGTTG TTCAAAACGC AGATCTTCAG
ATGTACGCTC TGAAGAACCT GAAAAAGCAA AAGCGCGTTC TGACGGAAGA GCCAGAGGTT
GACTAA
 
Protein sequence
MVTFFGVTKI FKRLKEIAIK DYLTGLYTRY YFFEEWLPME MERQKRKNGK GISFLIIDLD 
DFKTINDKYS HRMGDKLLKY VASEIIKNIR KTDCAVRFGG DEILIAFPDT DKKTVENIVK
RLEKKLIFNP VGLPIEFSYG IETWKPGENV EGVVQNADLQ MYALKNLKKQ KRVLTEEPEV
D