Gene Tpet_1187 details

Gene Information

• Locus tag: Tpet_1187
• Symbol: tsf
• ID: 5171521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1208865
• End bp: 1209464
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640563706
• Product: elongation factor Ts
• Protein accession: YP_001244777
• Protein GI: 148270317
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0264] Translation elongation factor Ts
• TIGRFAM ID: [TIGR00116] translation elongation factor Ts

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000118419
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATAT CCATGGACCT AATCAAAAAG CTCAGAGAGA TGACGGGAGC AGGTATTCTG 
GATTGTAAAA AAGCCCTCGA AGAAGCCGGC GGTGATATGG AAAAAGCGGT GGAGATTCTC 
AGAAAAAAGG GTGCTGCAAC AGCAGAAAAG AAAGCCGGAA GAACTACCAA AGAAGGAATC 
ATCGTTGCTT ACGTTCATTT CAACGGAAGA ATAGGTGTTC TGCTCGAAAT GAATTGCGAA 
ACAGATTTCG TGGCGCGAAC CGATGAGTTC AAAGAACTCG CCTACAATCT CGCAAAACAG 
GTTGCCGCGA TGAAGCCTCT GTACGTCAGG AGAGAGGACG TTCCCGCAGA AGTCATAGAG 
AAAGAGAAAG AAATCTACAG GGCCCAGATC AAGGATAAAC CTGAAAACAT CGTTGAAAAG 
ATCGTGGAAG GAAAGCTTGA AAAATACTTC GAACAGGTGT GTCTCTACGA ACAGACCTAC 
ATATTCGACG ATACAAAAAA GGTAAAAGAT CTCATAAACG AACTCATAGC GAAAACAGGA 
GAAAACATAA GGGTTTCAAG GTTTACAAGA TACGAGATAG GAGAGGGCTA TGAAGATTGA 

 

Protein sequence

MEISMDLIKK LREMTGAGIL DCKKALEEAG GDMEKAVEIL RKKGAATAEK KAGRTTKEGI 
IVAYVHFNGR IGVLLEMNCE TDFVARTDEF KELAYNLAKQ VAAMKPLYVR REDVPAEVIE 
KEKEIYRAQI KDKPENIVEK IVEGKLEKYF EQVCLYEQTY IFDDTKKVKD LINELIAKTG 
ENIRVSRFTR YEIGEGYED