Gene Tpet_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1176 
Symbol 
ID5170708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1200652 
End bp1200909 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content52% 
IMG OID640563695 
ProductF0F1 ATP synthase subunit C 
Protein accessionYP_001244766 
Protein GI148270306 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.575473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC TTGGAGATCT CGCTCAGGGA CTGGCGCTTC TTGGAAAATA TCTCGGTGCA 
GGACTATGTA TGGGAATAGG AGCCATCGGT CCTGGAATAG GAGAAGGTAA CATAGGAGCC
CACGCGATGG ACGCCATGGC GAGACAACCT GAAATGGTCG GTACCATCAC CACGAGGATG
CTTCTTGCCG ACGCCGTTGC CGAAACAACG GGTATATACT CTCTTCTCAT AGCCTTCATG
ATCCTCCTCG TGGTGTGA
 
Protein sequence
MENLGDLAQG LALLGKYLGA GLCMGIGAIG PGIGEGNIGA HAMDAMARQP EMVGTITTRM 
LLADAVAETT GIYSLLIAFM ILLVV