| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1124 |
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| Symbol | |
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| ID | 5170204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1149014 |
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| End bp | 1150348 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640563643 |
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| Product | xylose isomerase |
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| Protein accession | YP_001244714 |
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| Protein GI | 148270254 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000286004 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAT TTTTCCCAGA AATCCCAAAG ATTCAGTTTG AAGGCAAGGA AAGCACGAAT
CCGCTGGCGT TCAAGTTCTA CGATCCGAAC GAGGTGATCG ATGGAAAGCC TCTCAAGGAT
CACCTGAAGT TTTCCGTCGC CTTCTGGCAC ACCTTCGTGA ACGAGGGAAG AGATCCGTTT
GGAGATCCAA CCGCTGAACG CCCATGGAAC AGGTTCTCCG ATCCCATGGA CAAAGCTTTT
GCGAGGGTGG ACGCTCTCTT CGAGTTCTGC GAAAAGCTCA ACATCGAGTA CTTCTGTTTC
CACGACAGAG ACATCGCTCC CGAAGGAAAA ACGCTCAGAG AGACAAACAA GATACTGGAC
AAAGTGGTGG AAAGAATAAA GGAAAGAATG AAGGACAGCA ACGTGAAACT CCTCTGGGGA
ACGGCGAATC TGTTCTCCCA TCCGAGGTAC ATGCACGGCG CCGCGACGAC CTGCAGTGCG
GATGTCTTTG CCTACGCGGC AGCCCAGGTG AAGAAAGCCC TCGAGATCAC AAAAGAACTA
GGAGGAGAAG GCTACGTCTT CTGGGGTGGA AGAGAAGGCT ATGAAACTCT TCTCAACACA
GATCTCGGGC TGGAACTCGA AAATCTCGCG AGATTTCTCA GAATGGCAGT AGAGTACGCA
AAGAAGATCG GCTTCACCGG ACAGTTCCTC ATAGAACCCA AGCCGAAAGA ACCCACCAAG
CACCAGTACG ATTTCGATGT GGCAACGGCC TACGCTTTCC TGAAGAACCA CGGCCTTGAT
GAGTACTTCA AGTTCAACAT CGAAGCGAAC CACGCGACGC TTGCCGGCCA CACCTTCCAG
CACGAACTGA GGATGGCAAG GATCCTCGGA AAACTCGGAA GCATCGACGC CAACCAGGGA
GATCTCCTGC TCGGCTGGGA CACCGACCAG TTCCCAACGA ACATCTACGA CACAACACTT
GCCATGTACG AAGTGATAAA AGCAGGAGGA TTCACAAAAG GTGGCCTCAA CTTCGACGCG
AAGGTGAGGA GGGCTTCCTA CAAGGTGGAG GATCTCTTCA TCGGTCACAT CGTGGGAATG
GACACCTTCG CTCTCGGCTT CAAGATAGCG TACAAGCTCG TAAAGGATGA AGTACTCGAC
AGATTCATCG AAGAAAAGTA CAGGAGCTTC AAAGAAGGTA TCGGAAAAGA GATAGTAGAA
GGAAAAGCCG ACTTCGAAAA ACTCGAAGAG TATATAATAG ACAAAGAGGA TATCGAGCTT
CCATCCGGAA AGCAGGAGTA CCTCGAAAGC CTGCTCAACA GTTACATAGT GAAGACAATA
GCGGAACTGA GGTGA
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| Protein sequence | MMEFFPEIPK IQFEGKESTN PLAFKFYDPN EVIDGKPLKD HLKFSVAFWH TFVNEGRDPF
GDPTAERPWN RFSDPMDKAF ARVDALFEFC EKLNIEYFCF HDRDIAPEGK TLRETNKILD
KVVERIKERM KDSNVKLLWG TANLFSHPRY MHGAATTCSA DVFAYAAAQV KKALEITKEL
GGEGYVFWGG REGYETLLNT DLGLELENLA RFLRMAVEYA KKIGFTGQFL IEPKPKEPTK
HQYDFDVATA YAFLKNHGLD EYFKFNIEAN HATLAGHTFQ HELRMARILG KLGSIDANQG
DLLLGWDTDQ FPTNIYDTTL AMYEVIKAGG FTKGGLNFDA KVRRASYKVE DLFIGHIVGM
DTFALGFKIA YKLVKDEVLD RFIEEKYRSF KEGIGKEIVE GKADFEKLEE YIIDKEDIEL
PSGKQEYLES LLNSYIVKTI AELR
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