Gene Tpet_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1110 
SymbolribH 
ID5170244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1138849 
End bp1139346 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID640563627 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001244700 
Protein GI148270240 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA TCCAGGGAGA CTACAGAGGA GAAGGGTTGA AGATAGCCGT AGTCGTTCCT 
AGGTTCAACG ACCTTGTCAC TTCGAAACTC CTCGAGGGGG CGCTCGACGG GCTGAAAAGA 
CACGGTGTCT CAGACGAGAA CATAACGGTT GTGAGAATTC CGGGAAGTAT GGAAGCGATA 
TACACGCTCA AGAAACTCCT CGACCTCAAC GTGCACGATG CTATAATCGT TCTCGGTGCT 
GTGATAAGAG GGGAGACGTA CCACTTCAAC GTGGTGGCGA ACGAGATAGG TAAGGCTGTA 
GCGCAGTTCA ACATGACCTC TGATATTCCT ATTGTTTTCG GCGTTCTCAC CACGGACACC 
CTTGAACAGG CCCTCAACAG AGCCGGAGCA AAGAGTGGAA ACAAAGGTTT TGAAGCAGCG 
ATGGTAGCGA TCGAAATGGC AAATCTCAGA AAGAGACTCA GGAGGGATGT TTTTGAATCT 
GATAGCAACG GCAGGTAA
 
Protein sequence
MKVIQGDYRG EGLKIAVVVP RFNDLVTSKL LEGALDGLKR HGVSDENITV VRIPGSMEAI 
YTLKKLLDLN VHDAIIVLGA VIRGETYHFN VVANEIGKAV AQFNMTSDIP IVFGVLTTDT 
LEQALNRAGA KSGNKGFEAA MVAIEMANLR KRLRRDVFES DSNGR