| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1102 |
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| Symbol | |
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| ID | 5170102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1130372 |
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| End bp | 1132969 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563619 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001244692 |
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| Protein GI | 148270232 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0575058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGAAC TCTCGACGAG ATACAATCCA GCTGAGATAG AGACCAAATG GTACAGATAC
TGGGAAGAAA AAGGCTACTT CACACCGAAA GGTGTCGGAG AGAAATTCTC CATTGTGATA
CCGCCTCCAA ACATCACCGG AAGGATCCAC ATGGGGCACG CTCTGAACAT AACTCTCCAG
GATATCGTGG TCAGATACAA GAGAATGAAA GGGTACGATG TCCTCTGGGT ACCCGGAGAA
GACCACGCGG GTATCGCTAC GCAGAACGCG GTGGAAAAGT TCCTTCTTCA AACACAGGGA
AAGACGAGGG AGGAAATCGG AAGAGAAAAG TTCCTTGAGA TCACCTGGGA GTGGGCTAAC
AAATACAGGA GGGAAATAAG AGAACAGATA AAGGCTCTTG GAGCCTCGGT GGACTGGACA
AGGGAGAGGT TCACACTGGA CGAGGGGCTT AGCAGAGCCG TAAGGAAGGT GTTTGTTGAG
CTCTACAGGA AGGGTCTGAT ATACAGAGGA AAGTACATAG TGAACTGGTG TCCAAGGTGT
AAAACGGTGC TCTCGGACGA GGAAGTCGAA CACAAGGAAC ACAAGTCCAA ACTCTACTAC
GTGAAGTATC CCGTCAAAGA TTCCGATGAG TACATCGTTG TGGCAACCAC AAGACCCGAG
ACGATGCTCG GTGACACGGC CGTCGCCGTT CACCCGGAGG ATGAAAGGTA CAAAAACTTC
GTCGGTAAGA CGCTCATTCT TCCGCTCGTT GGAAGAGAAA TACCCGTTGT CGCGGACAAG
TACGTTGACC CGAAGTTCGG AACGGGTGCG GTGAAGGTAA CCCCTGCGCA CGACCCGAAC
GACTATCTCA TAGCTCAAAG ACACAACCTT CCAATGATAG AAATCTTCGA TGACAACGCG
AGGATAAACG AAAACGGTGG AAAATACAAA GGACTGGACA GGTACGAGGC GAGAGAGAAA
ATAGTGAAGG ATCTTGAAGA ACAGGGCTTT CTCGTCAAGA TAGAGGATTA CACTCATTCT
GTTGGGCACT GCTACAGATG TGACACGGTG ATAGAACCGA AGCTTTCCGA CCAGTGGTTC
GTTTCCACAA AACCGCTTGC CAAAAGAGCT ATTGAGGCCG TAGAAAATGG AGAGATAAGG
TTCTTCCCGG AGAGATGGAC GAAGGTCTAT CTGAACTGGA TGTACGAAAT CAGGGACTGG
TGTATCTCCA GACAGCTCTG GTGGGGCCAC AGGATTCCCG TCTGGTACTG TCAGGACTGC
GGCCATCTGA ACGTCTCCGA AGAAGACGTG GAAAAGTGTG AAAAGTGCGG CTCCACGAAT
CTGAAACAGG ACGAAGACGT GCTCGACACC TGGTTCTCCT CTGCACTCTG GCCGTTTTCG
ACTCTCGGTT GGCCCGAAGA AACCGAAGAC CTAAAGAGGT ACTATCCAAC AGACCTTCTC
GTCACAGGCT TTGACATAAT CTTCTTCTGG GTCGCGAGAA TGATCATGAT GGGATACGAG
TTCATGAACG ACAAACCTTT CAGCCATGTC TACATTCACC AGCTCGTCAG GGACAAATAC
GGAAGGAAGA TGAGCAAATC TCTCGGAAAC GGCATCGATC CCCTCGAGGT GATAGACGAG
TACGGTGCCG ATCCGATGAG GTTCACCCTC GCAATACTCG CCGCTCAGGG AAGGGACATA
AAGCTCGATC CGAGGTACTT CGACGCCTAC AAGAAGTTCG CGAACAAGAT ATGGAACGCC
ACGAGGTTTG TTTTGATGAA CCTTGAAGAT TACAAAGAGG TACCTCTCGA AAACCTCAAG
ACGGTTGACA AATGGATTCT CACGAGACTC AACAAAACGG TGGAAGAGGT CACAAACGCT
CTCGAGAACT ACGATTTCAA CATCGCAGCA AGGACCATTT ACAACTTCTT CTGGGATGAT
TTCTGTGATT GGTACATAGA GGCTTCAAAG CCGAGGTTGA AGACCGAAGA GAGGAACCTT
GTTCAGACGG TGCTTGTGAA GGTGCTGGAT GCGTCCTTGA GACTCCTTCA CCCGTTCATG
CCGTTCCTCA CAGAAGAGCT CTGGCAGAAA CTCCCCGTGG CTGGTGAATC CATAACGATA
GCGAAGTGGC CAGAGATCGA AAGAGAACTC ATCGATGAAA CCGCGGAGAA GGAATTCACC
AGACTCATGA ACATGGTGCG CGGTGTTAGG AACGTGAGGG CCGAGATGAA TCTGCCGCAG
TCTCAGAGAG TGAAGGTGTA CATCAAGGGC TACGAAGTCA CGGAAGAAGA AGAGCTCCTT
CTCAAGACTC TCGGAAACAT AGAAGAAGTC AGTTTCGTGA ACGAAAAACC GCCGAAGACT
GCAACAGCCT ACGTTGAAGA GGAAATAGAG GCCTACGTGG ATCTTGGAGG GCTCATAGAT
TTCGAAAAGG AAAAAGAGAG ATTGAAACAG ATCATGGAGA AGATCCAGAA AGAAATAGAT
CGTCTGGAGA AGAAACTCGC AAACAAAGAC TTTGTCGAAA AGGCACCTGA GGAAGTGGTC
GAAGAAACGA AAGAAAAACT CAACACCAAC AGGGAACGTC TCGCAAGGCT CGAATCCATC
CTCAGAGATC TAGAATGA
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| Protein sequence | MAELSTRYNP AEIETKWYRY WEEKGYFTPK GVGEKFSIVI PPPNITGRIH MGHALNITLQ
DIVVRYKRMK GYDVLWVPGE DHAGIATQNA VEKFLLQTQG KTREEIGREK FLEITWEWAN
KYRREIREQI KALGASVDWT RERFTLDEGL SRAVRKVFVE LYRKGLIYRG KYIVNWCPRC
KTVLSDEEVE HKEHKSKLYY VKYPVKDSDE YIVVATTRPE TMLGDTAVAV HPEDERYKNF
VGKTLILPLV GREIPVVADK YVDPKFGTGA VKVTPAHDPN DYLIAQRHNL PMIEIFDDNA
RINENGGKYK GLDRYEAREK IVKDLEEQGF LVKIEDYTHS VGHCYRCDTV IEPKLSDQWF
VSTKPLAKRA IEAVENGEIR FFPERWTKVY LNWMYEIRDW CISRQLWWGH RIPVWYCQDC
GHLNVSEEDV EKCEKCGSTN LKQDEDVLDT WFSSALWPFS TLGWPEETED LKRYYPTDLL
VTGFDIIFFW VARMIMMGYE FMNDKPFSHV YIHQLVRDKY GRKMSKSLGN GIDPLEVIDE
YGADPMRFTL AILAAQGRDI KLDPRYFDAY KKFANKIWNA TRFVLMNLED YKEVPLENLK
TVDKWILTRL NKTVEEVTNA LENYDFNIAA RTIYNFFWDD FCDWYIEASK PRLKTEERNL
VQTVLVKVLD ASLRLLHPFM PFLTEELWQK LPVAGESITI AKWPEIEREL IDETAEKEFT
RLMNMVRGVR NVRAEMNLPQ SQRVKVYIKG YEVTEEEELL LKTLGNIEEV SFVNEKPPKT
ATAYVEEEIE AYVDLGGLID FEKEKERLKQ IMEKIQKEID RLEKKLANKD FVEKAPEEVV
EETKEKLNTN RERLARLESI LRDLE
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