Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1072 |
Symbol | |
ID | 5170366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1100420 |
End bp | 1101577 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640563591 |
Product | acetylornithine aminotransferase |
Protein accession | YP_001244665 |
Protein GI | 148270205 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0280572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCTGA TGAACACTTA CAGCAGGTTT CCAGCAACGT TTGTCTATGG CAAAGGCTCC TGGATCTACG ACGAAAAAGG AAATGCGTAT CTTGATTTCA CCTCAGGAAT AGCGGTGAAC GTCCTCGGAC ACTCTCATCC TCGACTGGTG GAAGCCATAA AGGATCAGGC AGAGAAGCTC ATTCACTGTT CAAATCTTTT CTGGAACCGT CCGCAGATGG AACTGGCAGA ACTTCTGTCG AAGAACACGT TCGGTGGCAA GGTTTTCTTC GCGAACACGG GAACCGAAGC GAACGAAGCC GCCATAAAGA TAGCGAGAAA ATACGGAAAG AAAAAGAGCG AAAAAAAATA CAGAATCCTC TCCGCCCACA ATTCTTTCCA CGGAAGAACT CTGGGCTCCC TCACAGCGAC GGGACAGCCG AAATATCAGA AACCTTTCGA ACCACTCGTT CCCGGCTTTG AATACTTCGA GTTCAACAAC ATAGAAGATC TGAGAAAAAA GATGTCAGAA GACGTGTGTG CTGTGTTCCT CGAACCGATT CAGGGAGAAA GCGGAATAGT ACCAGCCACC AAAGAATTCC TTGAAGGGGC TAGAAAACTC TGCGACGAGT ACGATGCACT TCTTGTGTTC GACGAGGTTC AGTGTGGAAT GGGAAGGACA GGAAAACTCT TCGCGTATCA AAAGTACGGA GTCGTTCCAG ACGTTCTCAC AACCGCCAAG GGACTCGGTG GGGGAGTCCC CATCGGAGCT GTCATTGTGA ACGAAAGAGC GGACGTTCTG GAGCCAGGAG ATCACGGCAC CACGTTCGGA GGAAACCCGC TCGCCTGTAG GGCCGGGGTG ACCGTGATCA AAGAGTTGAC GAAGGAAGGC TTCCTCGAAG AAGTGGAAGA GAAAGGAAAC TACCTCATGG AAAAGCTCCA GGAAATGAAA GAAGAATTCG ACTTGGTAGC CGACGTGAGG GGAATGGGAC TCATGATAGG GATTCAGTTT AAAGAGGAAG TGAACAACAG AGAGATCGCC ACGAAATGCT TTGAAAATAA ACTGCTCGTT GTTCCAGCAG GTAACAACAC GGTCAGATTC TTACCACCAC TCACGGTAGA GTACGGAGAG ATAGACCTGG CGGTTGAGAC ACTCAAAAAA GTCCTGAGAG AAATTTGA
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Protein sequence | MYLMNTYSRF PATFVYGKGS WIYDEKGNAY LDFTSGIAVN VLGHSHPRLV EAIKDQAEKL IHCSNLFWNR PQMELAELLS KNTFGGKVFF ANTGTEANEA AIKIARKYGK KKSEKKYRIL SAHNSFHGRT LGSLTATGQP KYQKPFEPLV PGFEYFEFNN IEDLRKKMSE DVCAVFLEPI QGESGIVPAT KEFLEGARKL CDEYDALLVF DEVQCGMGRT GKLFAYQKYG VVPDVLTTAK GLGGGVPIGA VIVNERADVL EPGDHGTTFG GNPLACRAGV TVIKELTKEG FLEEVEEKGN YLMEKLQEMK EEFDLVADVR GMGLMIGIQF KEEVNNREIA TKCFENKLLV VPAGNNTVRF LPPLTVEYGE IDLAVETLKK VLREI
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