Gene Tpet_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1072 
Symbol 
ID5170366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1100420 
End bp1101577 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content49% 
IMG OID640563591 
Productacetylornithine aminotransferase 
Protein accessionYP_001244665 
Protein GI148270205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0280572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTGA TGAACACTTA CAGCAGGTTT CCAGCAACGT TTGTCTATGG CAAAGGCTCC 
TGGATCTACG ACGAAAAAGG AAATGCGTAT CTTGATTTCA CCTCAGGAAT AGCGGTGAAC
GTCCTCGGAC ACTCTCATCC TCGACTGGTG GAAGCCATAA AGGATCAGGC AGAGAAGCTC
ATTCACTGTT CAAATCTTTT CTGGAACCGT CCGCAGATGG AACTGGCAGA ACTTCTGTCG
AAGAACACGT TCGGTGGCAA GGTTTTCTTC GCGAACACGG GAACCGAAGC GAACGAAGCC
GCCATAAAGA TAGCGAGAAA ATACGGAAAG AAAAAGAGCG AAAAAAAATA CAGAATCCTC
TCCGCCCACA ATTCTTTCCA CGGAAGAACT CTGGGCTCCC TCACAGCGAC GGGACAGCCG
AAATATCAGA AACCTTTCGA ACCACTCGTT CCCGGCTTTG AATACTTCGA GTTCAACAAC
ATAGAAGATC TGAGAAAAAA GATGTCAGAA GACGTGTGTG CTGTGTTCCT CGAACCGATT
CAGGGAGAAA GCGGAATAGT ACCAGCCACC AAAGAATTCC TTGAAGGGGC TAGAAAACTC
TGCGACGAGT ACGATGCACT TCTTGTGTTC GACGAGGTTC AGTGTGGAAT GGGAAGGACA
GGAAAACTCT TCGCGTATCA AAAGTACGGA GTCGTTCCAG ACGTTCTCAC AACCGCCAAG
GGACTCGGTG GGGGAGTCCC CATCGGAGCT GTCATTGTGA ACGAAAGAGC GGACGTTCTG
GAGCCAGGAG ATCACGGCAC CACGTTCGGA GGAAACCCGC TCGCCTGTAG GGCCGGGGTG
ACCGTGATCA AAGAGTTGAC GAAGGAAGGC TTCCTCGAAG AAGTGGAAGA GAAAGGAAAC
TACCTCATGG AAAAGCTCCA GGAAATGAAA GAAGAATTCG ACTTGGTAGC CGACGTGAGG
GGAATGGGAC TCATGATAGG GATTCAGTTT AAAGAGGAAG TGAACAACAG AGAGATCGCC
ACGAAATGCT TTGAAAATAA ACTGCTCGTT GTTCCAGCAG GTAACAACAC GGTCAGATTC
TTACCACCAC TCACGGTAGA GTACGGAGAG ATAGACCTGG CGGTTGAGAC ACTCAAAAAA
GTCCTGAGAG AAATTTGA
 
Protein sequence
MYLMNTYSRF PATFVYGKGS WIYDEKGNAY LDFTSGIAVN VLGHSHPRLV EAIKDQAEKL 
IHCSNLFWNR PQMELAELLS KNTFGGKVFF ANTGTEANEA AIKIARKYGK KKSEKKYRIL
SAHNSFHGRT LGSLTATGQP KYQKPFEPLV PGFEYFEFNN IEDLRKKMSE DVCAVFLEPI
QGESGIVPAT KEFLEGARKL CDEYDALLVF DEVQCGMGRT GKLFAYQKYG VVPDVLTTAK
GLGGGVPIGA VIVNERADVL EPGDHGTTFG GNPLACRAGV TVIKELTKEG FLEEVEEKGN
YLMEKLQEMK EEFDLVADVR GMGLMIGIQF KEEVNNREIA TKCFENKLLV VPAGNNTVRF
LPPLTVEYGE IDLAVETLKK VLREI