Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1054 |
Symbol | |
ID | 5171228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1081015 |
End bp | 1082643 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640563572 |
Product | formate--tetrahydrofolate ligase |
Protein accession | YP_001244647 |
Protein GI | 148270187 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACCGA TCAAAGAGAT CGCCGATCAG TTGGGATTGA AAGACGACGT TCTCTATCCT TACGGCCACT ACATAGCGAA GATAGACCAC AGATTCTTGA AAAGCCTTGA AAATCGTGAA GATGGGAAAC TGATCCTCGT AACGGCAGTT ACTCCTACCC CTGCAGGTGA AGGAAAAACT ACCACCAGCA TAGGACTTTC CATGTCTCTG AACAGAATCG GTAAGAAATC GATAGTTACT CTGAGAGAGC CTTCCCTCGG CCCCACCCTT GGATTGAAAG GCGGTGCAAC AGGAGGTGGC AGGTCGAGGG TTCTTCCTTC TGATGAGATA AACCTTCATT TCACCGGAGA CATGCACGCC GTGGCCTCCG CCCACAATCT GCTGGCGGCC GTTCTGGATT CGCACATAAA ACACGGCAAC GAGCTCAAGA TAGACATAAC AAGAGTATTT TGGAAGCGAA CCATGGACAT GAACGACCGT GCTTTGAGAA GCATAGTGAT CGGTCTTGGA GGCTCAGCGA ACGGATTTCC AAGAGAAGAC AGTTTCATCA TCACGGCCGC TTCCGAAGTG ATGGCCGTTC TTGCTCTGTC CGAGAACATG AAGGACCTGA AAGAAAGACT TGGAAAAATA ATCGTAGCGC TCAACACTGA CAGGAAAATC GTCAGGGTCT CTGATCTTGG AATTCAGGGG GCCATGGCCG TTCTTTTGAA AGATGCCATA AATCCCAACC TTGTTCAGAC AACCGAAGGA ACTCCAGCGC TCATACACTG CGGACCTTTC GCCAACATCG CGCACGGCAC CAATTCCATC ATAGCGACGA AGATGGCCAT GAAGCTCTCC GAATACACGG TCACGGAAGC GGGTTTTGGA GCAGACCTCG GTGCCGAAAA ATTCATCGAC TTTGTTTCCC GTGTCGGTGG TTTTTATCCG AACGCGGCCG TTCTTGTGGC CACAGTACGA GCACTGAAAT ACCACGGTGG TGCGGACCTC AAAAACATAC ACGAGGAAAA CCTGGAAGCC CTCAAAGAAG GATTCAAAAA TCTCAGGGTA CACTTGGAAA ACCTGAGGAA ATTCAATCTA CCCGTCGTGG TAGCGCTGAA CAGGTTCATC ACGGACACAG AAAAGGAAAT AGCCTACGTG GTGAAAGAGT GCGAAAAACT CGGTGTGAGG GTAGCAGTCA GTGAGGTTTT TGAAAAGGGC AGCGAAGGTG GTGTCGAACT CGCAAAAGCC GTGACAGAAG CTGTGAAGGA CGTAAAACCG GTTTATCTCT ACGAAATGAA CGATCCTGTG GAAAAGAAGA TAGAGATTCT CGCAAAGGAG ATCTACAGAG CGGGAAGAGT GGAGTTTTCC GATACTGCAA AAAATGCCCT CAAATTCATT AAAAAACACG GTTTTGATGA GCTTCCCGTG ATCGTTGCCA AAACTCCAAA GTCCATTTCC CACGATCCGT CTCTCAGAGG TGCACCCGAA GGATACACGT TCGTTGTCAG CGACCTCTTC GTTTCCGCCG GGGCAGGCTT TGTCGTTGCG CTTTCAGGAG ACATAAATCT GATGCCCGGT CTTCCAGAAA GGCCGAACGC CCTGAACATG GACGTAGACG ACAGCGGTAA CATAGTAGGT GTTTCGTGA
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Protein sequence | MKPIKEIADQ LGLKDDVLYP YGHYIAKIDH RFLKSLENRE DGKLILVTAV TPTPAGEGKT TTSIGLSMSL NRIGKKSIVT LREPSLGPTL GLKGGATGGG RSRVLPSDEI NLHFTGDMHA VASAHNLLAA VLDSHIKHGN ELKIDITRVF WKRTMDMNDR ALRSIVIGLG GSANGFPRED SFIITAASEV MAVLALSENM KDLKERLGKI IVALNTDRKI VRVSDLGIQG AMAVLLKDAI NPNLVQTTEG TPALIHCGPF ANIAHGTNSI IATKMAMKLS EYTVTEAGFG ADLGAEKFID FVSRVGGFYP NAAVLVATVR ALKYHGGADL KNIHEENLEA LKEGFKNLRV HLENLRKFNL PVVVALNRFI TDTEKEIAYV VKECEKLGVR VAVSEVFEKG SEGGVELAKA VTEAVKDVKP VYLYEMNDPV EKKIEILAKE IYRAGRVEFS DTAKNALKFI KKHGFDELPV IVAKTPKSIS HDPSLRGAPE GYTFVVSDLF VSAGAGFVVA LSGDINLMPG LPERPNALNM DVDDSGNIVG VS
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