| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1053 |
|---|
| Symbol | nusB |
|---|
| ID | 5170315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1080575 |
|---|
| End bp | 1081003 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640563571 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_001244646 |
|---|
| Protein GI | 148270186 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC CGAGGCGAAG AATGAGGCTT GCTGTCTTCA AAGCCCTGTT TCAGCATGAA
TTCAGAAGAG ACGAAGATCT TGAACAAATT CTCGAGGAAA TTCTGGATGA AACCTACGAT
AAAAAGGCAA AGGAAGATGC CAGGCGCTAC ATAAGAGGTA TAAAAGAAAA CCTTCCCATG
ATAGACAATC TCATTTCCCG ATACCTAGAA AAGTGGTCTT TAAACCGACT ATCAGCTGTG
GACAGAAACG TTCTGAGACT CGCCACTTAT GAACTGCTCT TCGAAAAGGA CATCCCCATA
GAAGCGACCA TCGATGAAGC CATAGAAATA GCCAAGAGAT ACGGCACGGA GAACAGTGGA
AAATTCGTCA ACGGAATACT GGACAGAATC GCCAAAGAAC ACGCTCCAAA AGAAAAATTC
GAACTTTGA
|
|---|
| Protein sequence | MKTPRRRMRL AVFKALFQHE FRRDEDLEQI LEEILDETYD KKAKEDARRY IRGIKENLPM
IDNLISRYLE KWSLNRLSAV DRNVLRLATY ELLFEKDIPI EATIDEAIEI AKRYGTENSG
KFVNGILDRI AKEHAPKEKF EL
|
|---|
| |