| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1037 |
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| Symbol | |
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| ID | 5171163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1065552 |
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| End bp | 1066331 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563555 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001244631 |
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| Protein GI | 148270171 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01452] phosphoglycolate/pyridoxal phosphate phosphatase family
[TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGATA AAATAGAACT CTTCATTTTA GATATGGACG GGACTTTCTA TCTGGACGAT
TCGCTTCTTC CCGGATCTTT GGAATTCCTG GAGACTTTGA AAGAGAAAAA CAAAAGATTC
GTCTTTTTCA CCAACAACTC CTCGCTCGGC GCACAGGACT ACGTGAGGAA GCTGAGAAAC
ATGGGAGTGA ACGTGCCGAA CGATGCCGTT GTAACCTCTG GAGAAATCAC TGTGGAGTAC
ATGCTGAAAC GGTTCGGAAA GTGCCGTATC TTTCTTCTGG GAACCCCTCA GCTGAAGAAG
GTCTTCGAGG CTTACGGACA CGTCATAGAT GAGGAAAATC CGGATTTTGT GGTCCTGGGT
TTCGACAAAA CACTGACGTA TGAAAGGCTG AAAAAAGCCT GTATTTTACT CAGAAAGGGA
AAATCCTACA TAGCCACCCA TCCGGACATC AACTGTCCCT CGAAAGAAGG ACCCGTTCCA
GACGCTGGAA GCATCATGGC AGCGATAGAA GCCTCGACGG GAAGAAAGCC AGACTTGATC
GCTGGGAAAC CCAATCCACT GGTTGTGGAT GTGATATCCG AGAAGTTCGG TGTTCCAAAA
GAAAGAATGG CAATGGTAGG AGACAGGCTG TACACGGATG TGAAACTGGG AAAGAACGCC
GGGATAGTCT CCATTCTCGT TCTCACCGGT GAGACTACCC CGGAAGACCT TGAAAGGGCT
GAAACAAAAC CGGATTTCGT CTTCAAAAAC CTTGGAGAAT TAGCCAAGGC TGTCCAGTAG
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| Protein sequence | MLDKIELFIL DMDGTFYLDD SLLPGSLEFL ETLKEKNKRF VFFTNNSSLG AQDYVRKLRN
MGVNVPNDAV VTSGEITVEY MLKRFGKCRI FLLGTPQLKK VFEAYGHVID EENPDFVVLG
FDKTLTYERL KKACILLRKG KSYIATHPDI NCPSKEGPVP DAGSIMAAIE ASTGRKPDLI
AGKPNPLVVD VISEKFGVPK ERMAMVGDRL YTDVKLGKNA GIVSILVLTG ETTPEDLERA
ETKPDFVFKN LGELAKAVQ
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