Gene Tpet_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1003 
SymbolnrdR 
ID5171770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1034682 
End bp1035152 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID640563521 
Producttranscriptional regulator NrdR 
Protein accessionYP_001244597 
Protein GI148270137 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000818068 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGCC CGTTTTGTGG TTCGATGGAC ACAAGAGTGC TTGATTCGAG GCCCACTCTC 
GATGGAACCG CTATCAGAAG ACGCAGAGAG TGCTCTTCTT GTGGTAAAAG ATTCACCACT
TACGAGAGAT ACGAAGAAGC ACCTGTTCTT GTTGTAAAAA AGGATGGCAG GCGGGAGAAG
TTTGACAGGG AAAAGATAAA AAATGGTATG ATAAAAGCTT GTGAGAAGAG ACCTGTCACC
TACGAGCAGA TCGAGGAAGC TGTGAACAGA ATCTGCTTGA AACTCAGAGA AGAAGGATCC
TTCGAAGTTG AAACGAAACG AATAGGAGAA CTGGTTATGG AGGAGTTGAA GAAACTGGAT
CAGGTTGCTT ACGTACGATT CGCTTCAGTC TATCGTGATT TCAGGGAAGT GGATCAATTT
TTGGAAATCG TGAAAGAACT AAAAAGAGAG AAGGAGGGCG AAGAACAATG A
 
Protein sequence
MKCPFCGSMD TRVLDSRPTL DGTAIRRRRE CSSCGKRFTT YERYEEAPVL VVKKDGRREK 
FDREKIKNGM IKACEKRPVT YEQIEEAVNR ICLKLREEGS FEVETKRIGE LVMEELKKLD
QVAYVRFASV YRDFREVDQF LEIVKELKRE KEGEEQ