Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1003 |
Symbol | nrdR |
ID | 5171770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1034682 |
End bp | 1035152 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563521 |
Product | transcriptional regulator NrdR |
Protein accession | YP_001244597 |
Protein GI | 148270137 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000818068 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGCC CGTTTTGTGG TTCGATGGAC ACAAGAGTGC TTGATTCGAG GCCCACTCTC GATGGAACCG CTATCAGAAG ACGCAGAGAG TGCTCTTCTT GTGGTAAAAG ATTCACCACT TACGAGAGAT ACGAAGAAGC ACCTGTTCTT GTTGTAAAAA AGGATGGCAG GCGGGAGAAG TTTGACAGGG AAAAGATAAA AAATGGTATG ATAAAAGCTT GTGAGAAGAG ACCTGTCACC TACGAGCAGA TCGAGGAAGC TGTGAACAGA ATCTGCTTGA AACTCAGAGA AGAAGGATCC TTCGAAGTTG AAACGAAACG AATAGGAGAA CTGGTTATGG AGGAGTTGAA GAAACTGGAT CAGGTTGCTT ACGTACGATT CGCTTCAGTC TATCGTGATT TCAGGGAAGT GGATCAATTT TTGGAAATCG TGAAAGAACT AAAAAGAGAG AAGGAGGGCG AAGAACAATG A
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Protein sequence | MKCPFCGSMD TRVLDSRPTL DGTAIRRRRE CSSCGKRFTT YERYEEAPVL VVKKDGRREK FDREKIKNGM IKACEKRPVT YEQIEEAVNR ICLKLREEGS FEVETKRIGE LVMEELKKLD QVAYVRFASV YRDFREVDQF LEIVKELKRE KEGEEQ
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