Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1001 |
Symbol | lysS |
ID | 5171329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1032693 |
End bp | 1034201 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640563519 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001244595 |
Protein GI | 148270135 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000393607 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAAAG AGTTCAAAGA ACAACGACTC AATGAGATAC AGGAACTTCG TTCCATGGGT ATAGAGCCAT ATCCTTACAA ATTCGAAAAA GAACTCACTG CCAGGGAAAT AAGGGAAAAG TACGACTATC TCCAAGCTGG AGAAGTTCTT GAATCTGAAA AACTCTCTTT CGCAGGGAGA GTCATGTCGA TACGCCACCA TGGAAAGACG GCCTTCTTTC ACATGAAAGA TGACACAGGT CGAATCCAGG CTTACGTAAG GGCAGATTCT GTTGGAAAGG AAAAAATGGA TCTCTTCAAA AGACACGTCA AAATAGGTGA CTTTATAGGA GTAAGAGGCT TTCCGTTCAA AAGCAAAACC GGAGAGTTGA CCATTTACGT TCAAGAATAC ACGCTTCTGA GTAAGGCTCT ACGTCCCTTG CCCGAGAAGT GGCACGGCAT AAAAGATAAG GAAATCATAT ACAGGCAGAG GTACCTCGAA CTCATCGTAA GCGACGAGGC TATTGAGAGG TTCAGAAAGC GCTTCAAGGC TGTTCAAGTG ATACGGGAAT TTCTCAACAG CAGGGGATTC ATCGAGGTGG AAACGCCTAT CCTCCATTAC GTCACAGGTG GTGCGGAAGC GAGACCTTTT GTGACCCACC TAAACGTTTT TGATATAGAT ATGTATCTGA GAATCGCACC GGAGCTTTAC CTGAAGAGGT TGATCATCGG CGGTTTTGAG AAGATATACG AGATAGGAAA GAACTTCAGA AACGAAGGAA TATCTTACAA ACACAGTCCC GAGTTCACCA GCATAGAAAT CTACCAGGCT TACGCGGATT ACAACGATAT GATGGATCTC ACTGAAGAAC TGATAGTGGA AGTTGTGAAA AGAACATGCG GCACCTTGAA AATCTCCTAC CAGGGCAAGG AGATAGACTT CACACCACCC TGGAAAAGAG TGAGAATGAG AGACTTTCTC AAAGAAAAAC TCGGGGTGGA CATCCTCGAA GATCCCGATG AAGTGTTGTT GAAGAAGCTC GAAGAATATG GAGTGGAACT GGAAATAAAG AACAGAGCAC ACCTCATAGA TAAACTCAGA GATCTGGTGG AAGAAGAACT GGTGAATCCC ACCTTCATAA TCGATCATCC TGTGGTGATT TCCCCTCTTG CCAAAAGACA CCGAGAGGAT CCTAGACTCA CGGAAAGGTT CGAACTCATC ATATTTGGAA GGGAGATCGC GAACGCGTTC AGTGAGCTGA ACGATCCCGT TGATCAATAC CAGAGATTTC TCGAACAGGC GAAAATGAGA GAAGAGGGGG ACGAAGAAGC ACACATGATG GATCTCGATT TTGTGAGGGC CCTCGAGTAT GGAATGCCTC CCACGGGAGG ACTGGGAATC GGTCTTGACA GGCTCTTCAT GTTCATCACA GATTCCCCCA CAATAAGGGA TGTGATTCCC TTCCCAATTG TGAAACCCCA AAAATTCGAG GAAGAAGAGG CGGAATTCGA AGGAGGGTTT GAAGAATGA
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Protein sequence | MLKEFKEQRL NEIQELRSMG IEPYPYKFEK ELTAREIREK YDYLQAGEVL ESEKLSFAGR VMSIRHHGKT AFFHMKDDTG RIQAYVRADS VGKEKMDLFK RHVKIGDFIG VRGFPFKSKT GELTIYVQEY TLLSKALRPL PEKWHGIKDK EIIYRQRYLE LIVSDEAIER FRKRFKAVQV IREFLNSRGF IEVETPILHY VTGGAEARPF VTHLNVFDID MYLRIAPELY LKRLIIGGFE KIYEIGKNFR NEGISYKHSP EFTSIEIYQA YADYNDMMDL TEELIVEVVK RTCGTLKISY QGKEIDFTPP WKRVRMRDFL KEKLGVDILE DPDEVLLKKL EEYGVELEIK NRAHLIDKLR DLVEEELVNP TFIIDHPVVI SPLAKRHRED PRLTERFELI IFGREIANAF SELNDPVDQY QRFLEQAKMR EEGDEEAHMM DLDFVRALEY GMPPTGGLGI GLDRLFMFIT DSPTIRDVIP FPIVKPQKFE EEEAEFEGGF EE
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