Gene Tpet_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1001 
SymbollysS 
ID5171329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1032693 
End bp1034201 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content45% 
IMG OID640563519 
Productlysyl-tRNA synthetase 
Protein accessionYP_001244595 
Protein GI148270135 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000393607 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAG AGTTCAAAGA ACAACGACTC AATGAGATAC AGGAACTTCG TTCCATGGGT 
ATAGAGCCAT ATCCTTACAA ATTCGAAAAA GAACTCACTG CCAGGGAAAT AAGGGAAAAG
TACGACTATC TCCAAGCTGG AGAAGTTCTT GAATCTGAAA AACTCTCTTT CGCAGGGAGA
GTCATGTCGA TACGCCACCA TGGAAAGACG GCCTTCTTTC ACATGAAAGA TGACACAGGT
CGAATCCAGG CTTACGTAAG GGCAGATTCT GTTGGAAAGG AAAAAATGGA TCTCTTCAAA
AGACACGTCA AAATAGGTGA CTTTATAGGA GTAAGAGGCT TTCCGTTCAA AAGCAAAACC
GGAGAGTTGA CCATTTACGT TCAAGAATAC ACGCTTCTGA GTAAGGCTCT ACGTCCCTTG
CCCGAGAAGT GGCACGGCAT AAAAGATAAG GAAATCATAT ACAGGCAGAG GTACCTCGAA
CTCATCGTAA GCGACGAGGC TATTGAGAGG TTCAGAAAGC GCTTCAAGGC TGTTCAAGTG
ATACGGGAAT TTCTCAACAG CAGGGGATTC ATCGAGGTGG AAACGCCTAT CCTCCATTAC
GTCACAGGTG GTGCGGAAGC GAGACCTTTT GTGACCCACC TAAACGTTTT TGATATAGAT
ATGTATCTGA GAATCGCACC GGAGCTTTAC CTGAAGAGGT TGATCATCGG CGGTTTTGAG
AAGATATACG AGATAGGAAA GAACTTCAGA AACGAAGGAA TATCTTACAA ACACAGTCCC
GAGTTCACCA GCATAGAAAT CTACCAGGCT TACGCGGATT ACAACGATAT GATGGATCTC
ACTGAAGAAC TGATAGTGGA AGTTGTGAAA AGAACATGCG GCACCTTGAA AATCTCCTAC
CAGGGCAAGG AGATAGACTT CACACCACCC TGGAAAAGAG TGAGAATGAG AGACTTTCTC
AAAGAAAAAC TCGGGGTGGA CATCCTCGAA GATCCCGATG AAGTGTTGTT GAAGAAGCTC
GAAGAATATG GAGTGGAACT GGAAATAAAG AACAGAGCAC ACCTCATAGA TAAACTCAGA
GATCTGGTGG AAGAAGAACT GGTGAATCCC ACCTTCATAA TCGATCATCC TGTGGTGATT
TCCCCTCTTG CCAAAAGACA CCGAGAGGAT CCTAGACTCA CGGAAAGGTT CGAACTCATC
ATATTTGGAA GGGAGATCGC GAACGCGTTC AGTGAGCTGA ACGATCCCGT TGATCAATAC
CAGAGATTTC TCGAACAGGC GAAAATGAGA GAAGAGGGGG ACGAAGAAGC ACACATGATG
GATCTCGATT TTGTGAGGGC CCTCGAGTAT GGAATGCCTC CCACGGGAGG ACTGGGAATC
GGTCTTGACA GGCTCTTCAT GTTCATCACA GATTCCCCCA CAATAAGGGA TGTGATTCCC
TTCCCAATTG TGAAACCCCA AAAATTCGAG GAAGAAGAGG CGGAATTCGA AGGAGGGTTT
GAAGAATGA
 
Protein sequence
MLKEFKEQRL NEIQELRSMG IEPYPYKFEK ELTAREIREK YDYLQAGEVL ESEKLSFAGR 
VMSIRHHGKT AFFHMKDDTG RIQAYVRADS VGKEKMDLFK RHVKIGDFIG VRGFPFKSKT
GELTIYVQEY TLLSKALRPL PEKWHGIKDK EIIYRQRYLE LIVSDEAIER FRKRFKAVQV
IREFLNSRGF IEVETPILHY VTGGAEARPF VTHLNVFDID MYLRIAPELY LKRLIIGGFE
KIYEIGKNFR NEGISYKHSP EFTSIEIYQA YADYNDMMDL TEELIVEVVK RTCGTLKISY
QGKEIDFTPP WKRVRMRDFL KEKLGVDILE DPDEVLLKKL EEYGVELEIK NRAHLIDKLR
DLVEEELVNP TFIIDHPVVI SPLAKRHRED PRLTERFELI IFGREIANAF SELNDPVDQY
QRFLEQAKMR EEGDEEAHMM DLDFVRALEY GMPPTGGLGI GLDRLFMFIT DSPTIRDVIP
FPIVKPQKFE EEEAEFEGGF EE