| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0954 |
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| Symbol | |
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| ID | 5171032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 982252 |
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| End bp | 983487 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563472 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001244548 |
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| Protein GI | 148270088 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGT ACTTTGTTCT GTTGCTAGCA GTTCTTCTGG TTGGTGGACT CTTCGCTGTG
AAAATCACTA TGACATCTGG AGGGGTCGGA AAGGAACTCG AGGTACTGAA AAAGCAGCTG
GAGATGTTCC ACCAGCAGTA CCCAGATATC GAAGTGGAAA TCATTCCGAT GCCGGACAGT
TCAACTGAAA GGCACGATCT CTACGTCACG TACTTTGCCG CCGGAGAGAC GGATCCAGAC
GTTCTCATGC TCGATGTGAT ATGGCCTGCT GAGTTTGCTC CGTTCCTTGA AGATCTGACA
GCAGACAAAG ACTACTTCGA ACTCGGTGAA TTCCTACCCG GAACTGTGAT GTCTGTCACG
GTCAATGGAA GAATCGTTGC TGTTCCCTGG TTCACAGATG CAGGTCTCCT TTACTACAGA
AAAGACCTCC TCGAGAAATA CGGTTACGAT CACGCTCCGA GAACCTGGGA TGAACTCGTC
GAAATGGCAA AGAAGATCTC TCAGGCTGAA GGCATCCACG GATTCGTCTG GCAGGGTGCA
AGATACGAAG GCCTTGTCTG TGATTTCCTT GAATACCTCT GGTCTTTCGG TGGGGATGTG
CTCGATGAGA GTGGAAAAGT TGTGATCGAT TCTCCAGAAG CTGTTGCGGC TCTTCAGTTC
ATGGTCGATC TCATCTACAA GCACAAAGTC ACTCCTGAAG GAGTTACCAC CTACATGGAA
GAAGACGCAA GAAGAATCTT CCAGAACGGA GAAGCTGTTT TTATGAGGAA CTGGCCGTAC
GCCTGGTCCC TCGTGAACAG CGACGAATCC CCAATCAAAG GAAAGGTTGG AGTTGCTCCT
CTTCCAATGG GTCCTGGTGG AAGAAGAGCT GCCACACTCG GTGGGTGGGT CCTCGGTATA
AACAAATTCT CGTCACCTGA AGAAAAGGAA GCCGCAAAGA AGCTCATAAA GTTCCTCACA
AGTTACGACC AGCAGCTCTA CAAAGCGATC AACGCCGGAC AGAATCCAAC GAGAAAAGCC
GTTTACAAAG ATCCAAAACT CAAAGAAGCT GCTCCGTTCA TGGTTGAACT TCTCGGAGTT
TTCATCAACG CTCTTCCAAG ACCAAGGGTT GCGAACTACA CAGAAGTTTC CGATGTCATT
CAGAGGTACG TGCACGCTGC TCTGACAAGA CAGACAACAC CAGAAGACGC AATAAAGAAC
ATTGCAAAAG AGCTCAAATT CCTGCTTGGA CAGTAA
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| Protein sequence | MKKYFVLLLA VLLVGGLFAV KITMTSGGVG KELEVLKKQL EMFHQQYPDI EVEIIPMPDS
STERHDLYVT YFAAGETDPD VLMLDVIWPA EFAPFLEDLT ADKDYFELGE FLPGTVMSVT
VNGRIVAVPW FTDAGLLYYR KDLLEKYGYD HAPRTWDELV EMAKKISQAE GIHGFVWQGA
RYEGLVCDFL EYLWSFGGDV LDESGKVVID SPEAVAALQF MVDLIYKHKV TPEGVTTYME
EDARRIFQNG EAVFMRNWPY AWSLVNSDES PIKGKVGVAP LPMGPGGRRA ATLGGWVLGI
NKFSSPEEKE AAKKLIKFLT SYDQQLYKAI NAGQNPTRKA VYKDPKLKEA APFMVELLGV
FINALPRPRV ANYTEVSDVI QRYVHAALTR QTTPEDAIKN IAKELKFLLG Q
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