Gene Tpet_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0932 
Symbol 
ID5171025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp955054 
End bp955731 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID640563450 
Productdeoxyribonuclease V 
Protein accessionYP_001244526 
Protein GI148270066 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000151025 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACA GGCAGCTTCA CAGATGGGAT CTTCCTCCGG AGGAAGCGAT AAAAGTGCAG 
AACGAACTCA GAAAGAAGAT AAAACTCACT CCATACGAAG GAGAGCCCGA GTACGTGGCG 
GGAGTGGACC TTTCGTTTCC GGGAAAAGAA GAAGGGCTCG CGGTGATAGT GGTACTCGAA 
TATCCTTCTT TCAAAATATT AGAGGTCGTT TCTGAAAGGG GAGAGATAAC TTTTCCCTAC 
ATTCCGGGGC TCCTTGCTTT CAGAGAAGGA CCTCTGTTCT TGAAGGCCTG GGAAAAGCTG 
AGAACGAAAC CCGATGTTGT GGTCTTCGAT GGTCAGGGAC TGGCACATCC CAGAAAACTT 
GGGATAGCCT CCCACATGGG ACTCTTCATA GAGATCCCGA CCATTGGTGT GGCAAAATCC 
AGACTGTATG GAACGTTCAA AATGCCTGAA GATAAAAGGT GTTCCTGGAG TTATCTCTAC 
GACGGCGAGG AGATAATAGG CTGTGTGATC AGAACAAAGG AAGGAAGTGC TCCTATCTTC 
GTGTCTCCGG GCCATCTCAT GGACATTGAA AGTTCGAAAA GACTGATCAA GGCTTTTACC 
TTACCCGGAA GAAGGATACC GGAACCCACC AGACTGGCAC ACATCTACAC ACAACGGCTC 
AAAAAAGGCC TTTTCTGA
 
Protein sequence
MDYRQLHRWD LPPEEAIKVQ NELRKKIKLT PYEGEPEYVA GVDLSFPGKE EGLAVIVVLE 
YPSFKILEVV SERGEITFPY IPGLLAFREG PLFLKAWEKL RTKPDVVVFD GQGLAHPRKL 
GIASHMGLFI EIPTIGVAKS RLYGTFKMPE DKRCSWSYLY DGEEIIGCVI RTKEGSAPIF 
VSPGHLMDIE SSKRLIKAFT LPGRRIPEPT RLAHIYTQRL KKGLF