Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0924 |
Symbol | |
ID | 5170828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 946954 |
End bp | 948120 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640563442 |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_001244518 |
Protein GI | 148270058 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000324435 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAT ACTGGATTAG AAGAGCCCTT GAAGTAGTGA AAACGCCTTT TCTTCTTTTC GATCTGTCGG TCGTGGAAAA GAAATATCTG GAGATGAAAG CTGCTCTCAA AAAAGCGGAT ATTTACTACG CTGTGAAGGC AAACTCCCAC CCGCGTATTA TATCCCTTCT TGCCAGGTTG GGGAGTAATT TCGATGTGGC TTCCAAGGGG GAGATAGAAA AGCTCCTCGC ACTTGGTGTG GATGGGAAGA GAATGAGTTT TGGTAACACC ATAAAAAGAG AGGAAGACAT CGCGTTCGCG TACAAAAACG GTATAAGGCT CTTTGCAGTG GATAGTGAGA TGGAAGTGGA AAAAGTCGCT ATAAATGCTC CTGGAAGCTT CGTTTTTGTG AGAGTGGAAA CGGATGGTGC AGACGCAGAC TGGCCCCTTT CCAGAAAGTT TGGAACCAAT CCAGAGCATG CTCTTCAGCT TCTCTCCTAT GCTTCGAAGA TGAAACTGAT CCCCGCGGGA TTGAGTTTTC ACGTGGGATC TCAGAATTTG AATCCTGAAA GCTGGAAAAA GGCGATAGAG ATCGCGGGGA GAGTGTTCAA AAAAGCCATG AGATCCGGTT TGAATCTTTT CCTCTTGAAC GTTGGTGGAG GCTTTCCTGT TCAGCACACA AAGCCAATTC CAAGTATGGA AGAAATAGGA AAGGCAATCG AAGAGGCGAT AGACGAAAAC CTCTGGTTTG TCCACAATTT GAAAGTGATA GCCGAGCCCG GAAGGTACAT GGTCGGAGAA GCAGGCTGGC TTGTCACAAA AGTGCTTTTG AAGAGCGAAA GATCAGGTGA AAAATGGGTT TACATCGACG CGGGAGTATT TCACGGGCTC GCAGAAACTA TCCAAAACTT CGAGTACGAA ATCAGAGTCC TCGGAAAAGA AAGAGAAGAG CTCGAAGAGT ACCATCTGGC GGGTCCCACT TGTGACAGCG TGGATGTGAT ATACGACAGA ATCTTTCTTC CAAAGAGCAT CACTCTGAAC GACCTTGTGT GCTTCATAAA CGCGGGGGCT TACACGGTTG AGTACAACAC CCGTTTCAAC GGAATAGAAC CTCCAAAGAT GGTTTTCATC GAAGAACTCA CGGAGATCTC AATAGAGGAG AAAATCAAAA CACGAGTGCT GGATTGA
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Protein sequence | MMEYWIRRAL EVVKTPFLLF DLSVVEKKYL EMKAALKKAD IYYAVKANSH PRIISLLARL GSNFDVASKG EIEKLLALGV DGKRMSFGNT IKREEDIAFA YKNGIRLFAV DSEMEVEKVA INAPGSFVFV RVETDGADAD WPLSRKFGTN PEHALQLLSY ASKMKLIPAG LSFHVGSQNL NPESWKKAIE IAGRVFKKAM RSGLNLFLLN VGGGFPVQHT KPIPSMEEIG KAIEEAIDEN LWFVHNLKVI AEPGRYMVGE AGWLVTKVLL KSERSGEKWV YIDAGVFHGL AETIQNFEYE IRVLGKEREE LEEYHLAGPT CDSVDVIYDR IFLPKSITLN DLVCFINAGA YTVEYNTRFN GIEPPKMVFI EELTEISIEE KIKTRVLD
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