Gene Tpet_0900 details

Gene Information

• Locus tag: Tpet_0900
• ID: 5171702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 921746
• End bp: 923713
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640563418
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001244494
• Protein GI: 148270034
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACATAA GATTCAGGAT CATACTCATA ATGGTTGTGA TTCTTGTTTC TTTCGTTCTC 
AGTGCTTATC TGGTCCAGAG AGGCACATCG TCTCTTCTCA TCAGCAACGC AAAAGATTAC 
ATGGAAAAAT CGGTATCTTC TCTTTCGAAG TACATCTCCC AGAAGTTGAA CGAGGTTCAG 
AGAAATCTGA AAACTCTCCT TGGCAGCTCT CTCATAGGAG GTTACACGAT CGCTTCTAAC 
CTTCAGTCTG TTCTTCAGGG GGCTACGGAT ACAGTCTCCG TTGGTATTGT TGTCGATGAG 
ATGAGCGAAT CTGCTTATTT AGTTCTACCA GAAAAAATAG AAGAGAAGAA CTATTCAGAG 
TACGGAAAGT ACCTCAGTCT TATGAAGGAA AAGAACAAAA CTTCGCTTGT CCTTGCCGAA 
TCCATCGATG GAAAGCCTGT TTTGCTTTTC TTAGAGGGAA TCACAACGTT CGGTTCAGAA 
CCATCTGGAC TGATAGCACT AGGTATATCC CTCTCTGAGA ACTCCGATCT TTGGAAGTCA 
GTTGTAGAAG AAGGGAAAGC GAGCAAGAGT GGCTACGGGA TACTTGTCAC AGGTGATGGG 
AAGGTGTTGC TCCACAGGGA CATGGGGAAT TTCATGAGAG ACGTGAAAGA GCTTGGTGGC 
TTTGAGAAAG CGTTTGAAGA GGCAAAGAGA GGTGGGGAAA AATACGTAGA ATACGAATAC 
GACGGGAAGA AATACGCCGT GTGGGAGAAA GTACCTGGAT ACGACTTCTA CATCTTCTCG 
ACGGGGTACC TGGAAGAACT TCTTGCAGAA GGAAGGAAAG CGACCCTTGG GACGATAGTG 
ACGTATGTGG TGTTTGGTGG CGTGATCTTT GTGGTACTGT TTGTTTCGAT GATGCCGATA 
GTGAAGAGGA TGAGGCAGCA GGTGGAGAGA GTGAAGAGAT TCGGAGAAGG GGACCTGACA 
GTAGAGTTTG AAGCAAAAGG AAAAGACGAG CTGACCCAGA TGGAAGAGAG CCTGAAAGAA 
GCAGCACTCT CACTCAAAGA GATGATAGTG AGCATCATAG AAGCTGCAAA GGAGCTGAAC 
GGTGCATCAG AAGAGATAAA AGTTCTCTCA GAAGAGAGCC ACAGGATGTC AGAGAACCTG 
CACGAAGAAG CCAAAAAGAT ACTGGACGAA GCGAACAACA TGAGCAGTGC GTTGACAGAA 
GTGACGAGTG GAGTAGAAGA AGTGGCAGCG AGTGCTCAAA ACATCTCAAA GATCACCCAG 
GATTTGACAG AAAGGTCAGA AGCGGTGACG AAAGCGGCAA GGGAAGGGAC AGAGAGGGTA 
GAAGCGGTGG GAGGAGTCAT AAACAAACTC AAAGGGTCAG CAGAAAGACA GAGGGACTAC 
CTGAAAGAAC TCGTTGACTC AGCCAAGACG ATAGGAGAGA TAGTGGACAC GATCAGCTCG 
ATAGCAGAGC AGACGAACCT ACTTGCCTTG AACGCAGCGA TAGAAGCGGC GAGGGCAGGG 
GAAGCTGGAA GGGGCTTTGC GGTTGTGGCA GACGAGATAA GGAAACTTGC AGAAGAGAGC 
CAGAGGGCGA CAGAAGACAT AGCGAAGATG CTGAGCAATC TGAGGACGAC GATAGAACAC 
GTAGAGAACG GCTCGAAAGA GATGTTCGAA GGAGTGGACG AGATAGCGGT GATGGGAGAA 
GAAGTGACGA AGAGATTCAG AGAGATCCTT GGAAGGATAG AAGAGATCAA CAGCATGATA 
GAGAACACGG CAGCGACAGC GCAGGAGCAG GGGGCAGCTG CAGAAGAGAT GGCAAGTGCC 
ATGGACAACG TCACAAAGAT CGTTGAAGGG GTTGTGGAAA GCCTGAACAG GATGGAGTCT 
CTCATAGAAA ACCAGACCGA GTCTGCTGCC AGAGTCTCAG AGGCTGCCGA AAAACTCTCT 
TCCCTCTCTG AACAGCTCTC AACGCTCGTT CAAAAGTTCA AGGTGTGA 

 

Protein sequence

MNIRFRIILI MVVILVSFVL SAYLVQRGTS SLLISNAKDY MEKSVSSLSK YISQKLNEVQ 
RNLKTLLGSS LIGGYTIASN LQSVLQGATD TVSVGIVVDE MSESAYLVLP EKIEEKNYSE 
YGKYLSLMKE KNKTSLVLAE SIDGKPVLLF LEGITTFGSE PSGLIALGIS LSENSDLWKS 
VVEEGKASKS GYGILVTGDG KVLLHRDMGN FMRDVKELGG FEKAFEEAKR GGEKYVEYEY 
DGKKYAVWEK VPGYDFYIFS TGYLEELLAE GRKATLGTIV TYVVFGGVIF VVLFVSMMPI 
VKRMRQQVER VKRFGEGDLT VEFEAKGKDE LTQMEESLKE AALSLKEMIV SIIEAAKELN 
GASEEIKVLS EESHRMSENL HEEAKKILDE ANNMSSALTE VTSGVEEVAA SAQNISKITQ 
DLTERSEAVT KAAREGTERV EAVGGVINKL KGSAERQRDY LKELVDSAKT IGEIVDTISS 
IAEQTNLLAL NAAIEAARAG EAGRGFAVVA DEIRKLAEES QRATEDIAKM LSNLRTTIEH 
VENGSKEMFE GVDEIAVMGE EVTKRFREIL GRIEEINSMI ENTAATAQEQ GAAAEEMASA 
MDNVTKIVEG VVESLNRMES LIENQTESAA RVSEAAEKLS SLSEQLSTLV QKFKV