| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0877 |
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| Symbol | |
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| ID | 5170046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 897141 |
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| End bp | 898358 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563395 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001244471 |
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| Protein GI | 148270011 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000395057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAAGAT ATGTGATCAG AACCTACAAA GTCCCTGTGC CGGTGGAATT GTATCCTTTG
TGTTCCGAGC TGAACAGGAT CGCCGCTCGG ATCTACAACA AAACCATGTC GCTGGTCAAA
AAGATCAAAA ACAAGAAAGG TTTTTGGCTC TCACCGAACA CAGCGCAAAA ATACATCCTT
CGCTGGTCGA GCGCTATCGA TATCCACACT CACTCCAAAC AAGCCATGGT CCAGCTGTAC
TTTCAGGCAC TCAATAGCTA CTTTGTTGCA GTCAAAACAA ATCCACATGC AAAACCGCCA
TACAAGAGGA AAAATTTTCT GCCGTTCATT TGGAAAAATC AAGCCATCAA GCTTTTGCCA
GATGGGAAGG TCAAGCTCTC GATGGGACGC AATCGAGAGC CATTTGTAAT CCCCACAACG
TTGCCAGCCG GTACAACAAT CAGGCAAGCC AAGTTGGTTT ACGAAGCCGG CCGGTATTAT
CTTCACCTTG CGATAGAGGT GAAGAGTGAG CACAAGAGAG GCCAAAGCCA GAAAGTTATG
TCCGTAGACG TCGGAATACT CCGCCCGATA ACCTGTTTCG ATGGTTCTGA GGTGATTTCA
TATCACGGTG GTGTTCTCAA CAGCATACTC AGATACCGAA ACAAAAGACT AGCAGATATT
CAGCGGGCTT TGAGTCGATG CCAAAAGGGC TCACGAAGGT ATAAAAAACT GTCGAGAGCC
AAAAGAAGGG TGCTGTACAA GACGAGAAAC CAAATCAACG ACGTGCTCCA CAAAATCACG
AGCTACTTCA TCGGTTTATG CGTGCAAAAG AACATAGGCA CCATTGTCGT CGGAGACATT
ACGAACATAA GAGAACGCAC AAACGGCAAC GATAATTTCA ATCAAAAACT GCACCAATGG
GCCTTCAGAA AGCTCATGAG CCAGATAGAA TACAAAGCGC AAATATTCGG CATCGAGGTT
GTGCGCATTT CTGAAGCGCA TACAAGCAAA ACGTGTCCTG TATGCGGCAC TCAAAACAGG
CCGTCTGGAC GAAATTACAA GTGCGCCGGC TGCGGTTTTG AGTATCACAG GGACGGAGTG
GGAGCAATCA ACATTTGGAA AAGGTATCTT GGGACGAAGT CCCAAGTAGT AGCGGGCTTG
GCACCCGCCA GAGGTGTGAG GTTTAACCCG CACCTCTGTG GCCATGGAGC GATTAGCGCT
CCATGGAAGG CAGCCTAA
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| Protein sequence | MSRYVIRTYK VPVPVELYPL CSELNRIAAR IYNKTMSLVK KIKNKKGFWL SPNTAQKYIL
RWSSAIDIHT HSKQAMVQLY FQALNSYFVA VKTNPHAKPP YKRKNFLPFI WKNQAIKLLP
DGKVKLSMGR NREPFVIPTT LPAGTTIRQA KLVYEAGRYY LHLAIEVKSE HKRGQSQKVM
SVDVGILRPI TCFDGSEVIS YHGGVLNSIL RYRNKRLADI QRALSRCQKG SRRYKKLSRA
KRRVLYKTRN QINDVLHKIT SYFIGLCVQK NIGTIVVGDI TNIRERTNGN DNFNQKLHQW
AFRKLMSQIE YKAQIFGIEV VRISEAHTSK TCPVCGTQNR PSGRNYKCAG CGFEYHRDGV
GAINIWKRYL GTKSQVVAGL APARGVRFNP HLCGHGAISA PWKAA
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