Gene Tpet_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0854 
Symbol 
ID5170667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp871060 
End bp872103 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content43% 
IMG OID640563373 
Productendo-1,4-beta-xylanase 
Protein accessionYP_001244449 
Protein GI148269989 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TACCTTCTGT GCTGATCCTT TTGTTGGGAT GTGTTCCGGT TTTCAGCTCT 
CAAAATGTAT CTCTGAGAGA GCTCGCAGAA AAGCTGAACA TCTATATTGG TTTTGCTGCA
ATCAACAACT TTTGGTCTCT TTCCGACGAA GAAAAGTACA TGGAAGTTGC AAGAAGAGAA
TTCAACATCC TGACTCCCGA GAACCAGATG AAGTGGGATA CGATCCATCC AGAAAGAGAC
AGATACAATT TCACTCCCGC TGAAAAACAC GTTGAGTTTG CAGAAGAAAA CAACATGATC
GTGCATGGGC ACACTCTTGT CTGGCACAAC CAGCTTCCTG GATGGATCAC TGGTAGAGAA
TGGACAAAGG AAGAACTTTT GAACGTTCTT GAAGACCACA TAAAAACGGT GGTGTCTCAT
TTCAAAGGTA GAGTGAAGAT CTGGGATGTG GTGAACGAAG CGGTGAGCGA TTCTGGAACC
TACAGGGAAA GCGTGTGGTA CAAGACGATC GGTCCTGAAT ACATTGAAAA AGCGTTCAGA
TGGACAAAAG AAGCCGATCC AGATGCGATT CTCATCTACA ACGACTACAG CATAGAAGAA
ATCAACGCAA AATCGAACTT CGTCTACAAC ATGATAAAAG AGCTGAAAGA AAAGGGAGTA
CCTGTAGATG GAATAGGATT TCAGATGCAC ATAGACTACA GAGGGCTCAA TTATGACAGT
TTCAGAAGGA ATTTGGAGAG ATTTGCGAAA CTCGGTCTTC AAATATACAT CACAGAGATG
GATGTGAGAA TTCCTCTCAG TGGTTCGGAA GATTATTACT TGAAAAAACA GGCCGAAATT
TGTGCGAAGA TCTTCGATAT ATGCTTGGAC AACCCTGCGG TTAAAGCGAT CCAGTTCTGG
GGATTCACAG ACAAATACTC CTGGGTTCCC GGCTTTTTCA AAGGGTACGG AAAAGCGTTG
CTATTCGACG AGAATTACAA TCCCAAGCCT TGTTATTACG CGATAAAAGA GGTGCTGGAG
AAAAAGATAG AAGAAAGAAA ATGA
 
Protein sequence
MKILPSVLIL LLGCVPVFSS QNVSLRELAE KLNIYIGFAA INNFWSLSDE EKYMEVARRE 
FNILTPENQM KWDTIHPERD RYNFTPAEKH VEFAEENNMI VHGHTLVWHN QLPGWITGRE
WTKEELLNVL EDHIKTVVSH FKGRVKIWDV VNEAVSDSGT YRESVWYKTI GPEYIEKAFR
WTKEADPDAI LIYNDYSIEE INAKSNFVYN MIKELKEKGV PVDGIGFQMH IDYRGLNYDS
FRRNLERFAK LGLQIYITEM DVRIPLSGSE DYYLKKQAEI CAKIFDICLD NPAVKAIQFW
GFTDKYSWVP GFFKGYGKAL LFDENYNPKP CYYAIKEVLE KKIEERK