| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0846 |
|---|
| Symbol | |
|---|
| ID | 5171486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 860937 |
|---|
| End bp | 861707 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640563365 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001244441 |
|---|
| Protein GI | 148269981 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGATTG TAAGGATTGA AAATTTGTTC TTCCAATACA GAGGCGGATT CTCTCTGAAA
AACATAAACC TTTCTGTGAA AAAAGGGGAG TTTTTCGGCA TCGTCGGACC GAACGGCTCC
GGAAAGACTA CTCTTTTAAA GATCCTTGTG GGGATTTTTC GTCCTCAGAA AGGAACGGTT
CAGCTCCTCG GTAGGATACC GTGGGAGACT TCGAGAAAAG AGATGGCGAA GATAGTAACC
CTCGTTTCTC AGGATTTCTT TCCCTCCTAC GACTTCACTG TAAAAGAGAT AGTCGAAATG
GGACGGCTTC CACACTTGAG TCTTCTGAGT GGAACGTCCA GAAAGGATGA GGAGATAGTC
CTGAAAAGTC TGAAGCTAAC CGGAACACTG AAATTTGTCG ACAGAAACTT CTGGACATTG
AGCTCTGGAG AGCGTAGAAA GGTTGTGCTA TCGAAAGCGA TTGCGCAGGA CACGGAAATC
CTGCTCATCG ATGAACTCAC AGCCCATCTG GATTACAACA ACGTGAGTCT TGTGGGAAAC
GTGTTGAAAA GGTTGAAAGA ATCGGGAAAA ACCATCATCT CCGTTTTCCA CGACATAAAC
GTGGCATCTG CTCTGTGTGA TCGAATAGGC GTTATGAAAA ACGGTGAGAT GATAAAAACC
GGAGCACCCC CAGAGGTGGT GACCGAAGAG GTGCTCCGGA ATACGTTCGA AACGGAATTC
GTGGTACTCG AACATCCTGT CACAGGAAGA CCGCTAGCCT TTCTCAAATA G
|
|---|
| Protein sequence | MEIVRIENLF FQYRGGFSLK NINLSVKKGE FFGIVGPNGS GKTTLLKILV GIFRPQKGTV
QLLGRIPWET SRKEMAKIVT LVSQDFFPSY DFTVKEIVEM GRLPHLSLLS GTSRKDEEIV
LKSLKLTGTL KFVDRNFWTL SSGERRKVVL SKAIAQDTEI LLIDELTAHL DYNNVSLVGN
VLKRLKESGK TIISVFHDIN VASALCDRIG VMKNGEMIKT GAPPEVVTEE VLRNTFETEF
VVLEHPVTGR PLAFLK
|
|---|
| |