Gene Tpet_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0806 
Symbol 
ID5171356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp815821 
End bp818304 
Gene Length2484 bp 
Protein Length827 aa 
Translation table11 
GC content48% 
IMG OID640563325 
Productribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 
Protein accessionYP_001244401 
Protein GI148269941 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGT CCGATTTGAT CTCAAAGTGG ATCGATGTTG AACCTTCAAA AAATGCTCAG 
ATAATCCTCA GAGACAGGTA TTTCATGAAG GATCTGGATG GGAATTATCT GGAAACGAAA
TGGGAAGACG TGGCAAGAAG GGTGGCAAGA GTTGTAGCAA CGGCAGAGCT TCTGAACCCA
TCGTACAAGA AGAACGAAAA ACTCGACAGA ATAAAAGAAT GGGAGGATAC CTTCTTCAGA
GTTTTGAAAG CGAGGATCTT CATTCCAAAC AGTCCCACCC TCTTCAACGC AGGACTCGGG
GTGAAGCACG ATCTCCTGTG GAAGCCCATC GATCAGATGA CACTGGAAGA TTACGAAGAA
ATTTACAGAT CGAGAAACCA TCTTCATATG CTCTCCGCGT GCTTCGTAGT ACCCGTTGGC
GACAGCATCG AAGAGATCTT TGAAGCGGTG AAAGAGTACG CACTCATAAC GAAAGTGGGA
GGAGGAGTGG GGAGTAACTT TTCTGAGTTG AGGCCGAAGG GCAGTTTTGT GGCAGGCACA
CACGGAAAAG CGTCCGGTCC CGTTTCTTTC ATGCACGTTT TCAACTCCGC CATCTCCGTT
GTGAAACAGG GTTACAGAAG ACGCGGGGCA CTGATGGGCA TCTTGAACAT AAACCATCCC
GACATAGAAG AATTCATAGA CGCAAAGAAA GAAAACACGG GAGAAGCGGT GCTGAACTTC
TTCAACCTCT CTGTTGGATT TCCAATGGAC AAGAAAGAGA TTCTGAAACT CTACGAAGAA
GACGGTGAAC TCGAGCTTTC TCATCCAAGA AGCACGATCA GGAAGAAGGT TAAGATCAGA
GAACTCTTCA GAAAGATCGC TACAAATGCC TGGAAGAGTG GAGACCCGGG ACTTGCCTTC
CTCGGAGAGA TGAACAAATA CTATCCACTC TACCCGCACA GAAAGATCAA CTCGACCAAT
CCGTGCGGTG AGATCGGGCT TTCAGATTAC GAAGCCTGCA ACCTCGGTTC CATCGACGTT
GCAAAGTTCT ATAACAATGG TTTTGTGGAT TTAGAAGCGC TTCAGGAACT CGTCCAGATA
GCCGTTCGTT TCCTCGACAA CGTCATCGAT GTGAACGTGT TTCCAATAGA CAAGATCACA
AAAGCAGTCA AAGAGAGCAG AAGGCTCGGT CTTGGAATAA TGGGATTTGC CGATCTCCTC
TACAAGCTCG AAATTCCTTA CAATTCTCAG GAAGCTCGTG ATTTCGCGGC CAATCTCATG
GCTTTCATAG CGCTCCAAGC ACACAGAACT TCCTATGAAC TCGGAAAAGA AAAAGGGAAC
TTCCCGCTCC TTGAGATCTC GAGGTACAGA ACGGAAGACA ACTTCGTGCC TTTCGCTATG
GGTATGAGCA ACTACGACGA TGAAATAAGA GAAGTCATGA AGATGACAAA AGAGTTCAGA
AGAAACGTCG CTCTTCTGAC GATCGCACCC ACCGGTTCGA TCTCGAACAT AGCAGACACT
TCGTCAGGAT TGGAACCAAA CTTCCTCCTC GCATACACCA GATTCGTGAC GAAGGAAGAC
GGGACGAAAG AGCCTCTTCT CTACGTGAAC CAGGTGCTCA GAGAGAAATT GAATCCGGAG
ATCCTCAAGA AGATAGAGAA AGAACTCATA GAGAAGGGAA GCTTGAAGGA TATCCCGGAT
GTTCCGGAGA AAATAAAGAA AGTCTTTGTG GTCGCACTCG ATATAGATCC AATGGATCAC
CTCCTCATGC AGGATGCCTT CCAGAGGTAC GTTGATAACA ACATCTCCAA AACGATCAAC
ATGCCTCAGA GCGCAACCGT GGATGATGTT CTCAACGTGT ACCTTGAAGC CCTCAGAACA
AACGTTAGGG GCATCACCGT GTACAGAGAT GGCTCTCTGC AAACGCAAGT GCTGACGAAA
GCCTTGAAGA CACCGGAGGC TCCAAAGGTC CAGTTCTTCG TCGTCGATGA GAAGCTGAAG
CTCCACCCAA GACCAAGAAA AGACACTCTC AGAAGCGTCA CGAGAAAGTA CAAAAGACCG
GACGGGACCA CCTACATAAC GATATCCTTC GACGACACTG GTGAAGCCGT GGAGATATTC
ATCTCAAATG GCACCGAAAT GGCCGAAGCG ATTGGAAGAC TCTCCTCCAT AGCCCTCAGA
GCGGGTGTTT CCATGGACGA AATCATAGAA CAGCTCTCGA AGGTGAAGGG AGAATACTGC
AAGGGTCTCG CCGAAGAAAT CAAGAAAGCG CTTGAAGACT TCGCAAAACT GTGGCTCAGA
ACGGGTAAAG AGGCACCAGA GAGCGAGGAA GAGCCGATCG AAAGAGAAAA GTTCATAGTG
GCACACAACC TCAGATGGCA AAGCGGTTAC TACGTGGACG ACGAAGGAAA CGTGTACTGT
CCCGTTTGTC TCTCGAAGAA CTCTCTGATA AAGCAAGAAG GATGTGTGAG CTGTAAGAAC
TGCGGCTGGT CAAAGTGTGA GTGA
 
Protein sequence
MKLSDLISKW IDVEPSKNAQ IILRDRYFMK DLDGNYLETK WEDVARRVAR VVATAELLNP 
SYKKNEKLDR IKEWEDTFFR VLKARIFIPN SPTLFNAGLG VKHDLLWKPI DQMTLEDYEE
IYRSRNHLHM LSACFVVPVG DSIEEIFEAV KEYALITKVG GGVGSNFSEL RPKGSFVAGT
HGKASGPVSF MHVFNSAISV VKQGYRRRGA LMGILNINHP DIEEFIDAKK ENTGEAVLNF
FNLSVGFPMD KKEILKLYEE DGELELSHPR STIRKKVKIR ELFRKIATNA WKSGDPGLAF
LGEMNKYYPL YPHRKINSTN PCGEIGLSDY EACNLGSIDV AKFYNNGFVD LEALQELVQI
AVRFLDNVID VNVFPIDKIT KAVKESRRLG LGIMGFADLL YKLEIPYNSQ EARDFAANLM
AFIALQAHRT SYELGKEKGN FPLLEISRYR TEDNFVPFAM GMSNYDDEIR EVMKMTKEFR
RNVALLTIAP TGSISNIADT SSGLEPNFLL AYTRFVTKED GTKEPLLYVN QVLREKLNPE
ILKKIEKELI EKGSLKDIPD VPEKIKKVFV VALDIDPMDH LLMQDAFQRY VDNNISKTIN
MPQSATVDDV LNVYLEALRT NVRGITVYRD GSLQTQVLTK ALKTPEAPKV QFFVVDEKLK
LHPRPRKDTL RSVTRKYKRP DGTTYITISF DDTGEAVEIF ISNGTEMAEA IGRLSSIALR
AGVSMDEIIE QLSKVKGEYC KGLAEEIKKA LEDFAKLWLR TGKEAPESEE EPIEREKFIV
AHNLRWQSGY YVDDEGNVYC PVCLSKNSLI KQEGCVSCKN CGWSKCE