Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0806 |
Symbol | |
ID | 5171356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 815821 |
End bp | 818304 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563325 |
Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
Protein accession | YP_001244401 |
Protein GI | 148269941 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTGT CCGATTTGAT CTCAAAGTGG ATCGATGTTG AACCTTCAAA AAATGCTCAG ATAATCCTCA GAGACAGGTA TTTCATGAAG GATCTGGATG GGAATTATCT GGAAACGAAA TGGGAAGACG TGGCAAGAAG GGTGGCAAGA GTTGTAGCAA CGGCAGAGCT TCTGAACCCA TCGTACAAGA AGAACGAAAA ACTCGACAGA ATAAAAGAAT GGGAGGATAC CTTCTTCAGA GTTTTGAAAG CGAGGATCTT CATTCCAAAC AGTCCCACCC TCTTCAACGC AGGACTCGGG GTGAAGCACG ATCTCCTGTG GAAGCCCATC GATCAGATGA CACTGGAAGA TTACGAAGAA ATTTACAGAT CGAGAAACCA TCTTCATATG CTCTCCGCGT GCTTCGTAGT ACCCGTTGGC GACAGCATCG AAGAGATCTT TGAAGCGGTG AAAGAGTACG CACTCATAAC GAAAGTGGGA GGAGGAGTGG GGAGTAACTT TTCTGAGTTG AGGCCGAAGG GCAGTTTTGT GGCAGGCACA CACGGAAAAG CGTCCGGTCC CGTTTCTTTC ATGCACGTTT TCAACTCCGC CATCTCCGTT GTGAAACAGG GTTACAGAAG ACGCGGGGCA CTGATGGGCA TCTTGAACAT AAACCATCCC GACATAGAAG AATTCATAGA CGCAAAGAAA GAAAACACGG GAGAAGCGGT GCTGAACTTC TTCAACCTCT CTGTTGGATT TCCAATGGAC AAGAAAGAGA TTCTGAAACT CTACGAAGAA GACGGTGAAC TCGAGCTTTC TCATCCAAGA AGCACGATCA GGAAGAAGGT TAAGATCAGA GAACTCTTCA GAAAGATCGC TACAAATGCC TGGAAGAGTG GAGACCCGGG ACTTGCCTTC CTCGGAGAGA TGAACAAATA CTATCCACTC TACCCGCACA GAAAGATCAA CTCGACCAAT CCGTGCGGTG AGATCGGGCT TTCAGATTAC GAAGCCTGCA ACCTCGGTTC CATCGACGTT GCAAAGTTCT ATAACAATGG TTTTGTGGAT TTAGAAGCGC TTCAGGAACT CGTCCAGATA GCCGTTCGTT TCCTCGACAA CGTCATCGAT GTGAACGTGT TTCCAATAGA CAAGATCACA AAAGCAGTCA AAGAGAGCAG AAGGCTCGGT CTTGGAATAA TGGGATTTGC CGATCTCCTC TACAAGCTCG AAATTCCTTA CAATTCTCAG GAAGCTCGTG ATTTCGCGGC CAATCTCATG GCTTTCATAG CGCTCCAAGC ACACAGAACT TCCTATGAAC TCGGAAAAGA AAAAGGGAAC TTCCCGCTCC TTGAGATCTC GAGGTACAGA ACGGAAGACA ACTTCGTGCC TTTCGCTATG GGTATGAGCA ACTACGACGA TGAAATAAGA GAAGTCATGA AGATGACAAA AGAGTTCAGA AGAAACGTCG CTCTTCTGAC GATCGCACCC ACCGGTTCGA TCTCGAACAT AGCAGACACT TCGTCAGGAT TGGAACCAAA CTTCCTCCTC GCATACACCA GATTCGTGAC GAAGGAAGAC GGGACGAAAG AGCCTCTTCT CTACGTGAAC CAGGTGCTCA GAGAGAAATT GAATCCGGAG ATCCTCAAGA AGATAGAGAA AGAACTCATA GAGAAGGGAA GCTTGAAGGA TATCCCGGAT GTTCCGGAGA AAATAAAGAA AGTCTTTGTG GTCGCACTCG ATATAGATCC AATGGATCAC CTCCTCATGC AGGATGCCTT CCAGAGGTAC GTTGATAACA ACATCTCCAA AACGATCAAC ATGCCTCAGA GCGCAACCGT GGATGATGTT CTCAACGTGT ACCTTGAAGC CCTCAGAACA AACGTTAGGG GCATCACCGT GTACAGAGAT GGCTCTCTGC AAACGCAAGT GCTGACGAAA GCCTTGAAGA CACCGGAGGC TCCAAAGGTC CAGTTCTTCG TCGTCGATGA GAAGCTGAAG CTCCACCCAA GACCAAGAAA AGACACTCTC AGAAGCGTCA CGAGAAAGTA CAAAAGACCG GACGGGACCA CCTACATAAC GATATCCTTC GACGACACTG GTGAAGCCGT GGAGATATTC ATCTCAAATG GCACCGAAAT GGCCGAAGCG ATTGGAAGAC TCTCCTCCAT AGCCCTCAGA GCGGGTGTTT CCATGGACGA AATCATAGAA CAGCTCTCGA AGGTGAAGGG AGAATACTGC AAGGGTCTCG CCGAAGAAAT CAAGAAAGCG CTTGAAGACT TCGCAAAACT GTGGCTCAGA ACGGGTAAAG AGGCACCAGA GAGCGAGGAA GAGCCGATCG AAAGAGAAAA GTTCATAGTG GCACACAACC TCAGATGGCA AAGCGGTTAC TACGTGGACG ACGAAGGAAA CGTGTACTGT CCCGTTTGTC TCTCGAAGAA CTCTCTGATA AAGCAAGAAG GATGTGTGAG CTGTAAGAAC TGCGGCTGGT CAAAGTGTGA GTGA
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Protein sequence | MKLSDLISKW IDVEPSKNAQ IILRDRYFMK DLDGNYLETK WEDVARRVAR VVATAELLNP SYKKNEKLDR IKEWEDTFFR VLKARIFIPN SPTLFNAGLG VKHDLLWKPI DQMTLEDYEE IYRSRNHLHM LSACFVVPVG DSIEEIFEAV KEYALITKVG GGVGSNFSEL RPKGSFVAGT HGKASGPVSF MHVFNSAISV VKQGYRRRGA LMGILNINHP DIEEFIDAKK ENTGEAVLNF FNLSVGFPMD KKEILKLYEE DGELELSHPR STIRKKVKIR ELFRKIATNA WKSGDPGLAF LGEMNKYYPL YPHRKINSTN PCGEIGLSDY EACNLGSIDV AKFYNNGFVD LEALQELVQI AVRFLDNVID VNVFPIDKIT KAVKESRRLG LGIMGFADLL YKLEIPYNSQ EARDFAANLM AFIALQAHRT SYELGKEKGN FPLLEISRYR TEDNFVPFAM GMSNYDDEIR EVMKMTKEFR RNVALLTIAP TGSISNIADT SSGLEPNFLL AYTRFVTKED GTKEPLLYVN QVLREKLNPE ILKKIEKELI EKGSLKDIPD VPEKIKKVFV VALDIDPMDH LLMQDAFQRY VDNNISKTIN MPQSATVDDV LNVYLEALRT NVRGITVYRD GSLQTQVLTK ALKTPEAPKV QFFVVDEKLK LHPRPRKDTL RSVTRKYKRP DGTTYITISF DDTGEAVEIF ISNGTEMAEA IGRLSSIALR AGVSMDEIIE QLSKVKGEYC KGLAEEIKKA LEDFAKLWLR TGKEAPESEE EPIEREKFIV AHNLRWQSGY YVDDEGNVYC PVCLSKNSLI KQEGCVSCKN CGWSKCE
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