Gene Tpet_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0792 
Symbol 
ID5170390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp803673 
End bp804257 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content47% 
IMG OID640563311 
Productisochorismatase hydrolase 
Protein accessionYP_001244387 
Protein GI148269927 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTATT TCCCAGAAAG AGAAAAGAAA AGATTCACTT TGAAAAGGCC AGCACTTCTC 
ATCATCGATC TTCAAAGTTA TTTCACCTCT CCTGACTCCC CAGCATACCT CCGGGGAGTG
GAGGTTGCTA TCGAAAACAT CAGAAAACTG AAGATCTCCT TCGAAAGAGC GAAACTTCCC
GTGATAGCCA CAGTCCACGT AGGAGCGTCC CCGATGATGA AGAAGTGGTG GGGAAACGAA
GTGGATAAAA GGTGGGCCGT TCCCGTTTTT TCCGATGTTC TTCTTTTTGA AAAGAACACG
TACGACGCGT TTTATTCAAC GAAACTCGAA GAGGAGCTCA GATCAAGAAA CGTCAACCAG
CTGATCATAA CAGGTGTGAT GACACATCTT TGCTGTGAAA CTACAGCCCG AAGCGCTTTT
GTGAGAAACT TCGAAGTGAT AATGGTGGAG GACGCGCTGT GGGATAAAAA CGAATGGTAC
CACTTCTCTT CACTGAAAAA CCTGGCACAT GGAGTCGCGT ACATCGCAAA GACGGAGGAG
ATCCTGTGCG CGTTGGAATC GTTGGAGCAG GGCCAGCAGG AGTAG
 
Protein sequence
MFYFPEREKK RFTLKRPALL IIDLQSYFTS PDSPAYLRGV EVAIENIRKL KISFERAKLP 
VIATVHVGAS PMMKKWWGNE VDKRWAVPVF SDVLLFEKNT YDAFYSTKLE EELRSRNVNQ
LIITGVMTHL CCETTARSAF VRNFEVIMVE DALWDKNEWY HFSSLKNLAH GVAYIAKTEE
ILCALESLEQ GQQE