Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0792 |
Symbol | |
ID | 5170390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 803673 |
End bp | 804257 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563311 |
Product | isochorismatase hydrolase |
Protein accession | YP_001244387 |
Protein GI | 148269927 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1535] Isochorismate hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTATT TCCCAGAAAG AGAAAAGAAA AGATTCACTT TGAAAAGGCC AGCACTTCTC ATCATCGATC TTCAAAGTTA TTTCACCTCT CCTGACTCCC CAGCATACCT CCGGGGAGTG GAGGTTGCTA TCGAAAACAT CAGAAAACTG AAGATCTCCT TCGAAAGAGC GAAACTTCCC GTGATAGCCA CAGTCCACGT AGGAGCGTCC CCGATGATGA AGAAGTGGTG GGGAAACGAA GTGGATAAAA GGTGGGCCGT TCCCGTTTTT TCCGATGTTC TTCTTTTTGA AAAGAACACG TACGACGCGT TTTATTCAAC GAAACTCGAA GAGGAGCTCA GATCAAGAAA CGTCAACCAG CTGATCATAA CAGGTGTGAT GACACATCTT TGCTGTGAAA CTACAGCCCG AAGCGCTTTT GTGAGAAACT TCGAAGTGAT AATGGTGGAG GACGCGCTGT GGGATAAAAA CGAATGGTAC CACTTCTCTT CACTGAAAAA CCTGGCACAT GGAGTCGCGT ACATCGCAAA GACGGAGGAG ATCCTGTGCG CGTTGGAATC GTTGGAGCAG GGCCAGCAGG AGTAG
|
Protein sequence | MFYFPEREKK RFTLKRPALL IIDLQSYFTS PDSPAYLRGV EVAIENIRKL KISFERAKLP VIATVHVGAS PMMKKWWGNE VDKRWAVPVF SDVLLFEKNT YDAFYSTKLE EELRSRNVNQ LIITGVMTHL CCETTARSAF VRNFEVIMVE DALWDKNEWY HFSSLKNLAH GVAYIAKTEE ILCALESLEQ GQQE
|
| |