Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0771 |
Symbol | |
ID | 5171053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 782287 |
End bp | 783945 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563289 |
Product | prephenate dehydratase |
Protein accession | YP_001244366 |
Protein GI | 148269906 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGTTT ATGTTTCCGG GAAAGGAACT CTTATGGACG CTTTGAGAAA GGAACTGGAA GATTCAGAGT GGCAGCTTTC CGAATCGATT GAAGACGCGG ATCTCATCGT CTCGAGTGAG ATTCTCGAGA TATTATCTTC GAATCAGAGA ATCGTTGATC TCTATCCCAT CAAGGAAAAA TCAATTCCGT TTTATAAGGA AAAATCGATT CGCTTTGCAA GCATCTTTCC GGTCTTTCAC GGAGAATTCG CTTACTCTGA GTTTTATGTT GTTGAGAAGG TCTCCGATGA AGCAATCGAG AACTTTCTTG ATTTTCTGAG AAAATTGGGT GTTGTGTTAA AGGACGTGTT ATGGGATGAT TATGTGAAAC TTCTGGACAG GTCGTGTGCT GTTTTCTACC TTGGTTCAGC GTTTCGGGAT CCCTTTTTGA TCGATCACGT TTCTCATCTT CTTTCTTGGG AGGAAGAGAA GGAATCGTTT CTGAGACGGG GGAAAGAAGT CATTGCAAAC CTCAGCGAAG GAAGCACTCC TGAAGAGACA CCCAACATCG TCTCAAAAGT CCTCGCTGCT TTGAGAGATC CTTCCGATAT CACTGAGATG AGGCACAAAA TCAGGTTGAT AGATTTCATA CTGCTCAGGT TTATCGAAGA GAGAATGAAA GTGGCAAGAG ATGTCGCAAA GGAAAAGAAA AAGACAGACT CTCCCATCGT TATAAGGGAT ATAGAAGAAC AGAAGATAAA GGAGATTCTG GACAGGACAG ATCTCAATCC TGTTAGAATG AGACGCATAT TCGAGGAAAT AATGAAGCTT GCCAAAGAAG AGGAGTACAG ATTACTTGGA ATTTCCAAGA CGGTGGCCGT GCTGGGGCCC ATGGGAAGTT TCAGTGATGA GATGGCCATG AAACTGATAG GTTCAAGAAT ACCCCTGAAG TACTGTTCCA CAACTGACGA GATCATAGAA ATGGTGGAAA AAGGTGAGGT AGATTATGGA ATCGTGCCTA TTGAGAATTC CACCTATGGA ACGGTCATCC CTGTACTGGA CGCCTTGCTC AACCACGAAG TGGAGGTGTT TGGTGAGGCA AAGCTCGAGA TACACCACTG TCTCGTGGCA AAGAAAAAAC TGGATCTGAA GGAGATAAAA AGGATCTACT CTCATCCCCA GGCCATATCT CAGTCTCTTG GATTCATCAA CACGTACCTT TCGCACGCTG AGATTCGGTA CACTTCTTCG ACGAGCGACG CTGTAAACCT CCTGGATGAC GAATCCGCTG CCATCATGTC AGAGAGTGCC GCAAAGATGT ATGGGTTACT CATACTGAGG AGGAGCATTC AGGACTTGAA AGAAAAGAAT ATAACGAGGT TCTACATCAT AAGAAGGAAA ACAGGAAAGA TGGAAGGAAA ATACACCTCC CTTTTCTTTG GAGTTCAGGA CAGACCGGGC TCTTTGAAGG CAGTTCTGGA TATCTTCGCA AGCAGAGGAA TAAACCTCAG AAAGCTGGAG TCAAGGCCCG CAAGGACGTT CTTGGGAGAT TACGTGTTCT TTGTGGAAGT TGAGGCACCT TTGAAAGAAG AGGATATTAG GGACCTGGAA AGGGTCACGG CGTTTTACAA GATCATAGGT GTGTTTGATG AGGTAGAAGA GCTCGATGTG TTCAAATGA
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Protein sequence | MKVYVSGKGT LMDALRKELE DSEWQLSESI EDADLIVSSE ILEILSSNQR IVDLYPIKEK SIPFYKEKSI RFASIFPVFH GEFAYSEFYV VEKVSDEAIE NFLDFLRKLG VVLKDVLWDD YVKLLDRSCA VFYLGSAFRD PFLIDHVSHL LSWEEEKESF LRRGKEVIAN LSEGSTPEET PNIVSKVLAA LRDPSDITEM RHKIRLIDFI LLRFIEERMK VARDVAKEKK KTDSPIVIRD IEEQKIKEIL DRTDLNPVRM RRIFEEIMKL AKEEEYRLLG ISKTVAVLGP MGSFSDEMAM KLIGSRIPLK YCSTTDEIIE MVEKGEVDYG IVPIENSTYG TVIPVLDALL NHEVEVFGEA KLEIHHCLVA KKKLDLKEIK RIYSHPQAIS QSLGFINTYL SHAEIRYTSS TSDAVNLLDD ESAAIMSESA AKMYGLLILR RSIQDLKEKN ITRFYIIRRK TGKMEGKYTS LFFGVQDRPG SLKAVLDIFA SRGINLRKLE SRPARTFLGD YVFFVEVEAP LKEEDIRDLE RVTAFYKIIG VFDEVEELDV FK
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