Gene Tpet_0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0771 
Symbol 
ID5171053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp782287 
End bp783945 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content44% 
IMG OID640563289 
Productprephenate dehydratase 
Protein accessionYP_001244366 
Protein GI148269906 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTTT ATGTTTCCGG GAAAGGAACT CTTATGGACG CTTTGAGAAA GGAACTGGAA 
GATTCAGAGT GGCAGCTTTC CGAATCGATT GAAGACGCGG ATCTCATCGT CTCGAGTGAG
ATTCTCGAGA TATTATCTTC GAATCAGAGA ATCGTTGATC TCTATCCCAT CAAGGAAAAA
TCAATTCCGT TTTATAAGGA AAAATCGATT CGCTTTGCAA GCATCTTTCC GGTCTTTCAC
GGAGAATTCG CTTACTCTGA GTTTTATGTT GTTGAGAAGG TCTCCGATGA AGCAATCGAG
AACTTTCTTG ATTTTCTGAG AAAATTGGGT GTTGTGTTAA AGGACGTGTT ATGGGATGAT
TATGTGAAAC TTCTGGACAG GTCGTGTGCT GTTTTCTACC TTGGTTCAGC GTTTCGGGAT
CCCTTTTTGA TCGATCACGT TTCTCATCTT CTTTCTTGGG AGGAAGAGAA GGAATCGTTT
CTGAGACGGG GGAAAGAAGT CATTGCAAAC CTCAGCGAAG GAAGCACTCC TGAAGAGACA
CCCAACATCG TCTCAAAAGT CCTCGCTGCT TTGAGAGATC CTTCCGATAT CACTGAGATG
AGGCACAAAA TCAGGTTGAT AGATTTCATA CTGCTCAGGT TTATCGAAGA GAGAATGAAA
GTGGCAAGAG ATGTCGCAAA GGAAAAGAAA AAGACAGACT CTCCCATCGT TATAAGGGAT
ATAGAAGAAC AGAAGATAAA GGAGATTCTG GACAGGACAG ATCTCAATCC TGTTAGAATG
AGACGCATAT TCGAGGAAAT AATGAAGCTT GCCAAAGAAG AGGAGTACAG ATTACTTGGA
ATTTCCAAGA CGGTGGCCGT GCTGGGGCCC ATGGGAAGTT TCAGTGATGA GATGGCCATG
AAACTGATAG GTTCAAGAAT ACCCCTGAAG TACTGTTCCA CAACTGACGA GATCATAGAA
ATGGTGGAAA AAGGTGAGGT AGATTATGGA ATCGTGCCTA TTGAGAATTC CACCTATGGA
ACGGTCATCC CTGTACTGGA CGCCTTGCTC AACCACGAAG TGGAGGTGTT TGGTGAGGCA
AAGCTCGAGA TACACCACTG TCTCGTGGCA AAGAAAAAAC TGGATCTGAA GGAGATAAAA
AGGATCTACT CTCATCCCCA GGCCATATCT CAGTCTCTTG GATTCATCAA CACGTACCTT
TCGCACGCTG AGATTCGGTA CACTTCTTCG ACGAGCGACG CTGTAAACCT CCTGGATGAC
GAATCCGCTG CCATCATGTC AGAGAGTGCC GCAAAGATGT ATGGGTTACT CATACTGAGG
AGGAGCATTC AGGACTTGAA AGAAAAGAAT ATAACGAGGT TCTACATCAT AAGAAGGAAA
ACAGGAAAGA TGGAAGGAAA ATACACCTCC CTTTTCTTTG GAGTTCAGGA CAGACCGGGC
TCTTTGAAGG CAGTTCTGGA TATCTTCGCA AGCAGAGGAA TAAACCTCAG AAAGCTGGAG
TCAAGGCCCG CAAGGACGTT CTTGGGAGAT TACGTGTTCT TTGTGGAAGT TGAGGCACCT
TTGAAAGAAG AGGATATTAG GGACCTGGAA AGGGTCACGG CGTTTTACAA GATCATAGGT
GTGTTTGATG AGGTAGAAGA GCTCGATGTG TTCAAATGA
 
Protein sequence
MKVYVSGKGT LMDALRKELE DSEWQLSESI EDADLIVSSE ILEILSSNQR IVDLYPIKEK 
SIPFYKEKSI RFASIFPVFH GEFAYSEFYV VEKVSDEAIE NFLDFLRKLG VVLKDVLWDD
YVKLLDRSCA VFYLGSAFRD PFLIDHVSHL LSWEEEKESF LRRGKEVIAN LSEGSTPEET
PNIVSKVLAA LRDPSDITEM RHKIRLIDFI LLRFIEERMK VARDVAKEKK KTDSPIVIRD
IEEQKIKEIL DRTDLNPVRM RRIFEEIMKL AKEEEYRLLG ISKTVAVLGP MGSFSDEMAM
KLIGSRIPLK YCSTTDEIIE MVEKGEVDYG IVPIENSTYG TVIPVLDALL NHEVEVFGEA
KLEIHHCLVA KKKLDLKEIK RIYSHPQAIS QSLGFINTYL SHAEIRYTSS TSDAVNLLDD
ESAAIMSESA AKMYGLLILR RSIQDLKEKN ITRFYIIRRK TGKMEGKYTS LFFGVQDRPG
SLKAVLDIFA SRGINLRKLE SRPARTFLGD YVFFVEVEAP LKEEDIRDLE RVTAFYKIIG
VFDEVEELDV FK