| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0723 |
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| Symbol | |
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| ID | 5171001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 726177 |
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| End bp | 727925 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563230 |
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| Product | hydrogenase, Fe-only |
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| Protein accession | YP_001244319 |
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| Protein GI | 148269859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGATG TAAGGATTGT TATAAATGGT AGAACGCTTA CAGTACCTGA TAACCTGACG
GTCATCGAAG CCTGTGAGAA GGCAGGAATA GAGATTCCAG CTCTGTGTCA CCACCCAAGG
CTTGGGGAAT CAATAGGTGC GTGTAGAGTC TGTGTCGTTG AGGTGGAAGG AGCGAGAAAC
CTCCAGCCTG CGTGTGTGAC AAAAGTGAGA GATGGCATGG TGATAAAGAC CTCCTCTGAT
AGGGTGAAGA CGGCCAGGAA GTTCAACCTT GCACTTCTTC TCTCTGAACA TCCCAACGAT
TGTATGACGT GTGAAGCGAA CGGAAGGTGT GAGTTCCAGG ATCTGATCTA TAAATACGAC
GTGGACCCCA TTTTCGGATA CGGTACCAAA GAAGGACTAT TCGACAAAAG CAGTCCCGCT
ATAGTCAGAG ATCTTTCCAA GTGTGTCAAG TGCCAGCGCT GTGTTAGAAC ATGTTCCGAA
CTTCAGGGAA TGCACATCTA CTCTATGGTA GAGAGAGGTC ATAGAACTTA TCCTGGAACT
CCTTTCGACA TGCCCGTCTA TGAAACAGAT TGTATAGGTT GTGGTCAGTG TGCTGCGTTC
TGTCCAACGG GCGCTATAGT TGAAAATTCG GCAGTGAAAG TTGTCCTGGA AGAACTGGAA
AAGAAAGAAA AGATCCTCGT TGTTCAAACC GCACCATCGG TGAGAGTGGC GATTGGCGAA
GAATTTGGAT ACGCTCCTGG TACCATTTCT ACTGGCCAGA TGGTTGCTGC TCTTAGAAGA
CTCGGCTTCG ATTACGTCTT CGACACGAAC TTTGGGGCAG ACCTTACCAT AATGGAAGAA
GGAAGTGAAT TTCTCGAAAG ACTTGAAAAA GGCGACCTTG AGGACCTTCC CATGTTCACT
TCTTGTTGTC CTGGATGGGT GAACCTTGTG GAAAAGGTCT ATCCCGAGCT CAGAACGAGG
CTTTCCTCTG CCAAGTCACC CCAAGGTATG CTTTCTGCTC TGGTGAAAAC CTACTTCGCG
GAAAAACTCG GAGTGAAACC GGAAGACATT TTCCACGTAT CCATCATGCC CTGTACCGCG
AAGAAGGACG AGGCTTTGAG AAAACAGCTC ATGGTGAACG GTGTTCCAGC GGTGGATGTT
GTTCTCACCA CGAGAGAACT TGGAAAACTC ATAAGGATGA AGAAGATACC GTTTGCGAAC
CTTCCAGAGG AAGAATACGA CGCACCGCTT GGAATCTCCA CGGGAGCGGC GGTACTCTTT
GGTGTTACGG GTGGTGTGAT GGAGGCCGCT TTGAGAACTG CGTACGAACT CAAAACGGGA
AAGACACTAC CGAAGATCGT TTTTGAAGAT GTGAGAGGAC TCAAAGGTGT CAAGGAAGCC
GAAATAGATC TGGACGGCAA AAAGATAAGG ATCGCTGTGG TTCACGGTAC AGCCAACGTG
AGAAATCTGG TGGAAAAGAT TCTGAGAAGA GAAGTGAAGT ATCATTTCGT TGAAGTGATG
GCGTGTCCCG GTGGATGTAT CGGAGGCGGA GGCCAACCTT ACAGCAGAGA TCCGGAGATC
CTCAGAAAGA GGGCAGAAGC CATCTACACC ATCGACGAAA GAATGGTTTT GAGGAAATCC
CACGAGAACC CTGCCATAAA GAAGCTGTAC GAAGAGTACC TCGAACATCC GCTCAGTCAC
AAAGCTCACG AGCTTCTTCA CACCTACTAC GAAGACAGGT CAAGGAAGAA AAGACTTGCG
GTAAAATAA
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| Protein sequence | MADVRIVING RTLTVPDNLT VIEACEKAGI EIPALCHHPR LGESIGACRV CVVEVEGARN
LQPACVTKVR DGMVIKTSSD RVKTARKFNL ALLLSEHPND CMTCEANGRC EFQDLIYKYD
VDPIFGYGTK EGLFDKSSPA IVRDLSKCVK CQRCVRTCSE LQGMHIYSMV ERGHRTYPGT
PFDMPVYETD CIGCGQCAAF CPTGAIVENS AVKVVLEELE KKEKILVVQT APSVRVAIGE
EFGYAPGTIS TGQMVAALRR LGFDYVFDTN FGADLTIMEE GSEFLERLEK GDLEDLPMFT
SCCPGWVNLV EKVYPELRTR LSSAKSPQGM LSALVKTYFA EKLGVKPEDI FHVSIMPCTA
KKDEALRKQL MVNGVPAVDV VLTTRELGKL IRMKKIPFAN LPEEEYDAPL GISTGAAVLF
GVTGGVMEAA LRTAYELKTG KTLPKIVFED VRGLKGVKEA EIDLDGKKIR IAVVHGTANV
RNLVEKILRR EVKYHFVEVM ACPGGCIGGG GQPYSRDPEI LRKRAEAIYT IDERMVLRKS
HENPAIKKLY EEYLEHPLSH KAHELLHTYY EDRSRKKRLA VK
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