| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0719 |
|---|
| Symbol | |
|---|
| ID | 5170040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 721502 |
|---|
| End bp | 723841 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640563226 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_001244315 |
|---|
| Protein GI | 148269855 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTGTTCCA GATACTTTAC ATCCTCTCTT TCCTTGTGGG GTGAAGCGTT GCCGATACTG
TTAGAAGAAT TCCTCAACGA AGTCGAGAAA ATGCTCAAAA ATCAGGTGAA CACACGGAGA
ATTTACCAGC TCCTTCAGGA GCTGGATGAT CCTTTACTGG ACAACAAAGA CCTCGAAGAG
AAACTTCAAG CTTTTCTCGA CTACGCGAAA GAAATTCCCA ACCTTCCGGA AGTAAGGAAA
AGGTACAGAA TCCAGAAATC TCTGGAAATG ATAGAAAAGC TGAGAAGCTG GTTTCTCATA
GACTACTTAG AATGTTCTGG AGAAGAGGTC GATCTCTCAA CGGATATCCA GTACGCAAAA
GGAGTGGGAC CCAACAGAAA AAAGAAACTA AAAAAACTCG GAATAGAAAC GCTGAGAGAC
CTCCTCGAGT TTTTCCCAAG GGATTACGAA GACAGAAGGA AGATCTTCAA ACTGAACGAT
CTTCTTCCAG GTGAAAAGGT GACAACCCAG GGAAAGATCG TGAGCGTTGA GACAAAAAGA
TTCCAGAACA TGAACATCTT GACTGCCGTT CTGTCTGACG GTTTGGTGCA CGTTCTTTTG
AAATGGTTCA ACCAGGAATA CCTCCAGACC TATCTGAAAC AGCTCACCGG AAAAGAAGTT
TTCGTGACCG GCACCGTGAA ATCGAACGCG TACACGGGCC AGTACGAAAT TCACAACGCC
GAGGTAACAC CGAAAGAGGG GGAATACGCA AGAAGGATAC TTCCCATATA CCGTTTGACC
TCGGGAATTT CACAAAAACA AATGAGAAAG ATCTTCGAGG AAAACATCCC ATCTCTCTGC
TGTTCGTTGA AAGAAACCCT TCCAGAAAGG ATTCTTGAGA AGAGAAAACT GCTTGGTGTG
AAAGACGCGT ACTACGGAAT GCACTTTCCC AAAACCTTCT ATCACCTCGA AAAGGCCCGG
GAGAGGCTTG CCTACGAAGA ACTTTTCGTA CTTCAGTTGG CTTTCCAGAA GATCAGAAAA
GAGCGGGAAA AGCACGGAGG GATTCCAAAG AAAATAGAAG GAAAACTCGC AGAGGAGTTT
ATAAAGTCCC TTCCCTTCAA GCTGACGAAT TCTCAAAAGA GAGCTCATCA GGAGATAAGA
AACGATATGA TCTCTGAAAA ACCGATGAAC AGGCTCCTTC AAGGGGATGT GGGCTCTGGA
AAGACCGTCG TGGCACAGCT CGCCATACTC GACAACTACG AAGCGGGTTT CCAGACGGCC
TTCATGGTGC CAACCTCGAT CCTCGCGATC CAGCACTACA GAAGAACCAT CGAGAGTTTT
TCGAAATTCA ACATCCACGT GGCACTCCTC ATAGGAGCAA CCACGCCCTC AGAGAAGGAG
AAAATAAAAT CCGGCCTCAG GAACGGTCAA ATAGACGTGG TGATAGGAAC ACACGCACTG
ATACAGGAAG ACGTTCATTT CAAGAACCTG GGACTGGTCA TAATCGACGA ACAGCACCGC
TTCGGTGTGA AACAAAGAGA AGCCCTCATG AACAAGGGAA AGATGGTGGA CACACTGGTG
ATGAGTGCCA CTCCCATTCC CAGAAGTATG GCCCTTGCCT TCTACGGGGA TCTCGATGTC
ACAGTGATAG ACGAGATGCC TCCTGGAAGA AAAGAAGTGC AGACCATGCT CGTTCCGATG
GATAGAGTGA ACGAAATCTA CGAGTTCGTG AGGCAAGAAG TGATGAAGGG AGGACAGGCT
TTCATCGTTT ATCCGCTCAT CGAAGAGTCG GACAAACTGA ACGTGAAATC CGCTGTGGAG
ATGTACGAAT ACCTCTCGAA AGAAGTCTTC CCGGAGTTCA AACTGGGTCT CATGCACGGA
CGGCTTTCTC AGGAGGAAAA GGACAGAGTC ATGTTAGAGT TCGCCGAAGG AAGGTACGAC
ATCCTCGTTT CCACAATGGT TATAGAAGTC GGGATAGACG TTCCGAGAGC GAACGTGATG
GTGATAGAAA ACCCAGAGAG GTTTGGCCTT GCCCAGCTCC ACCAGCTTCG TGGAAGAGTG
GGAAGGGGAG GTCAGGAGGC TTACTGCTTC CTCGTTGTTG GAGACGTGGG AGAGGAAGCG
ATGGAAAGGT TGAGATTCTT CACACTCAAC ACGGATGGCT TCAAAATAGC CGAGTACGAT
TTGAAAACGA GGGGCCCTGG AGAGTTCTTC GGTGTGAAAC AGCACGGTTT GAGCGGCTTT
AAAGTGGCCG ATCTATACAG AGATCTGAAG CTCCTGGAAT GGGCAAGAGA AGATGTCCAG
GAAATCGACG TGGAAGGAAT AGAACTCCCG GAAGAGATAA AACTCATCGA AGTAGGCTGA
|
|---|
| Protein sequence | MCSRYFTSSL SLWGEALPIL LEEFLNEVEK MLKNQVNTRR IYQLLQELDD PLLDNKDLEE
KLQAFLDYAK EIPNLPEVRK RYRIQKSLEM IEKLRSWFLI DYLECSGEEV DLSTDIQYAK
GVGPNRKKKL KKLGIETLRD LLEFFPRDYE DRRKIFKLND LLPGEKVTTQ GKIVSVETKR
FQNMNILTAV LSDGLVHVLL KWFNQEYLQT YLKQLTGKEV FVTGTVKSNA YTGQYEIHNA
EVTPKEGEYA RRILPIYRLT SGISQKQMRK IFEENIPSLC CSLKETLPER ILEKRKLLGV
KDAYYGMHFP KTFYHLEKAR ERLAYEELFV LQLAFQKIRK EREKHGGIPK KIEGKLAEEF
IKSLPFKLTN SQKRAHQEIR NDMISEKPMN RLLQGDVGSG KTVVAQLAIL DNYEAGFQTA
FMVPTSILAI QHYRRTIESF SKFNIHVALL IGATTPSEKE KIKSGLRNGQ IDVVIGTHAL
IQEDVHFKNL GLVIIDEQHR FGVKQREALM NKGKMVDTLV MSATPIPRSM ALAFYGDLDV
TVIDEMPPGR KEVQTMLVPM DRVNEIYEFV RQEVMKGGQA FIVYPLIEES DKLNVKSAVE
MYEYLSKEVF PEFKLGLMHG RLSQEEKDRV MLEFAEGRYD ILVSTMVIEV GIDVPRANVM
VIENPERFGL AQLHQLRGRV GRGGQEAYCF LVVGDVGEEA MERLRFFTLN TDGFKIAEYD
LKTRGPGEFF GVKQHGLSGF KVADLYRDLK LLEWAREDVQ EIDVEGIELP EEIKLIEVG
|
|---|
| |