Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0670 |
Symbol | smpB |
ID | 5170730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 678265 |
End bp | 678717 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640563177 |
Product | SsrA-binding protein |
Protein accession | YP_001244266 |
Protein GI | 148269806 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000585556 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAGG TTGTTGCCAC GAACAAAAAA GCCTACACGG ACTACGAGAT CCTGGAAACT TACGAAGCGG GAATCGTTCT CACAGGAACG GAAGTGAAAT CCCTGAGGAA CGGCTCAGTC AATTTCAAGG ATTCCTTCTG TAGATTCAAG AACGGGGAGC TTTACCTTTT GAATTTACAC ATTCCACCCT ACAGTCACGG TGGAGTTTAC AACCACGATC CTGAAAGGCC GAGGAAACTG CTTCTTCACA AAAGAGAACT GAAGAGACTC ATGGGTAAGG TACAGGAAGA GGGAGTAACG ATAGTTCCAC TGAAGATATA CTTCAACGAT CGCGGGATTG CAAAAGTGGA GATAGCCGTT GCTCGAGGAA AAAAGAAGTA TGACAAGAGA GAAGCGATAA AAAAGAGGGA AATGGAAAGA AAGATCAGGG AGTACATGAA GTATTCGAGA TAG
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Protein sequence | MVKVVATNKK AYTDYEILET YEAGIVLTGT EVKSLRNGSV NFKDSFCRFK NGELYLLNLH IPPYSHGGVY NHDPERPRKL LLHKRELKRL MGKVQEEGVT IVPLKIYFND RGIAKVEIAV ARGKKKYDKR EAIKKREMER KIREYMKYSR
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