| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0656 |
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| Symbol | |
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| ID | 5171723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 662483 |
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| End bp | 664789 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563163 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_001244252 |
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| Protein GI | 148269792 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.79655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAACA GACGTGAGGT TTCAAAATTG CTTTCAGAGA GAGTGTTGCT TTTGGATGGA
GCCTACGGAA CGGAGTTCAT GAAGTACGGA TACGATGACC TTCCCGAAGA GCTGAATATA
AAAGCACCCG ACGTGGTGCT GAAGGTTCAT AGAAGTTACA TAGAGAGTGG ATCGGATGTC
ATTCTGACGA ACACGTTCGG TGCCACAAGG ATGAAACTGA GAAAACACGG CCTGGAGGAC
AAACTGGATC CTATTGTGAG AAACGCTGTG AGAATCGCAA GAAGAGCAGC TGGAGAAAAG
CTTGTTTTTG GAGATATCGG ACCGACGGGA GAACTTCCCT ATCCACTCGG AAACACTTTG
TTCGAGGAAT TCTACGAGAA CTTCAGAGAA ACCGTGAAGA TAATGGTCGA GGAAGGTGTG
GATGGAATCA TCTTTGAGAC GTTCTCGGAC ATTCTAGAGT TGAAAGCCGC TGTGCTCGCG
GCAAGGGAAG TCTCCCGTGA TGTTTTCCTG ATTGCCCACA TGACATTCGA TGAGAAGGGA
AGAAGTCTCA CAGGGACAGA TCCCGCAAAC TTCGCCATCA CGTTCGATGA ACTGGATGTC
GATGCCCTCG GTATAAACTG TTCACTCGGG CCCGAAGAGA TCCTTCCCAT TTTTCAGGAA
CTGTCCCAGT ACACAGACAA GTTTCTCGTA GTTGAACCGA ACGCGGGAAA GCCCATCGTG
GAAAACGGGA AAACCGTGTA TCCTTTGAAA CCACATGACT TTGCCGTTCA TATAGATTCC
TATTACGAAC TCGGTGTGAA CATATTCGGA GGCTGTTGCG GAACCACCCC TGAACACGTG
AAGCTCTTCA GAAAAGTTCT TGGAAATAGA AAGCCTCTTA AAAGAAAGAA AAAGAGAATA
TTTGCTGTTT CTTCTCCTTC AAAACTCGTG ACGTTCGATC ACTTTGTTGT CATAGGAGAG
AGGATAAACC CGGCAGGTAG AAAGAAGCTA TGGGCGGAGA TGCAGAAAGG AAACGAAGAA
ATCGTGATCA ACGAAGCAAA GACACAGGTG GAAAAAGGTG CGGAAGTGCT CGATGTGAAC
TTCGGGATAG AATCCCAGAT AGACGTACGA TACGTGGAAA AGATCGTTCA GGCACTTCCG
TATGTTTCGA ACGTTCCTCT CTCCTTGGAC ATCCAAAGCG TTGACCTCAC AGAGAAAGCG
CTCAGAACCT ACCCGGGAAG ACCCCTTTTC AACTCGTCCA AGGTGGATGA AGAAGAACTC
GAAAAGAAAA TAAACCTGTT GAAGAAATAC GGTGGAACAC TCATCGTACT TTTGATGGGA
AAAGACGTTC CAAAAAGCTT CGAAGAGAGA AAAGAGTACT TCGAAAAGGC TCTGAAAATC
CTGGAGAGAC ACAATTTCTC AGACAGAGTG ATCTTCGATC CAGGAGTTCT GCCTCTCGGT
GCAGAAGGAA AACCGGTAGA AGTACTGAAG ACCATAGAAT TCATTTCAAA CAGGGGTTTC
AACACGACTG TTGGTCTTTC CAATCTGTCT TTCGGACTTC CTGACAGAAG TTATTACAAC
ACCGCTTTTC TCGTTCTTGG AATATCTAAA GGCCTGAGCT CTGCCATCAT GAATCCCCTC
GACGAAATAC TAATGAAGAC CTTGAACGCT ACACTTGTGA TATTAGAGAA GAAGGAACTT
CCCAGAGCTG AAGTGAAGGA AGAAAAACTG GTTGAAATCA TACTCTCCGG GAACCGGTCG
GAACTCGAGA GGCTCGTGGA GGATTTTCTG AAGGAAAAAG ATCCTCTTTC CATAATAGAA
GAACAATTGA GGCCGGCGAT GGAGCGTATT GGAGAACTCT ACGATAAGGG AAAAATCTTT
CTTCCGCAAC TCATCCTCGC CGCTCAAACG GTGAAACCCG CGTTCGACAA ACTGACATCG
ATGCTTCCGT CAGACAGTCA GGGTGAAACG TTCGTCATTG CAACAGTCAA GGGTGATGTG
CATGACATAG GAAAGAACAT AGTGGCGTCT GTCATCAGAA GCAGCGGGTA CCGCGTGGTG
GACCTTGGAA AGGACGTGGA AACATCGAAA ATATTGGAAA CCGTGGAAAA AGAAAGACCC
GTTGCACTCG GTCTGTCTGC AATGATGACA ACCACCGTCG GAAGAATAAA GGAAGTTGTG
GAAAAGCTCA AAGAAAAGAA CCTGAAAATC CCCGTCATAG TGGGTGGTGC TTCCCTGAAC
GAAAAACTTG CAAAGGAGCT AGGAGCGGAC TATTACGCAA GGAACGCTTC CGAAGCGGTA
AAAATACTGA AATCTCTCGG GAGATGA
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| Protein sequence | MRNRREVSKL LSERVLLLDG AYGTEFMKYG YDDLPEELNI KAPDVVLKVH RSYIESGSDV
ILTNTFGATR MKLRKHGLED KLDPIVRNAV RIARRAAGEK LVFGDIGPTG ELPYPLGNTL
FEEFYENFRE TVKIMVEEGV DGIIFETFSD ILELKAAVLA AREVSRDVFL IAHMTFDEKG
RSLTGTDPAN FAITFDELDV DALGINCSLG PEEILPIFQE LSQYTDKFLV VEPNAGKPIV
ENGKTVYPLK PHDFAVHIDS YYELGVNIFG GCCGTTPEHV KLFRKVLGNR KPLKRKKKRI
FAVSSPSKLV TFDHFVVIGE RINPAGRKKL WAEMQKGNEE IVINEAKTQV EKGAEVLDVN
FGIESQIDVR YVEKIVQALP YVSNVPLSLD IQSVDLTEKA LRTYPGRPLF NSSKVDEEEL
EKKINLLKKY GGTLIVLLMG KDVPKSFEER KEYFEKALKI LERHNFSDRV IFDPGVLPLG
AEGKPVEVLK TIEFISNRGF NTTVGLSNLS FGLPDRSYYN TAFLVLGISK GLSSAIMNPL
DEILMKTLNA TLVILEKKEL PRAEVKEEKL VEIILSGNRS ELERLVEDFL KEKDPLSIIE
EQLRPAMERI GELYDKGKIF LPQLILAAQT VKPAFDKLTS MLPSDSQGET FVIATVKGDV
HDIGKNIVAS VIRSSGYRVV DLGKDVETSK ILETVEKERP VALGLSAMMT TTVGRIKEVV
EKLKEKNLKI PVIVGGASLN EKLAKELGAD YYARNASEAV KILKSLGR
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