| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0648 |
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| Symbol | |
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| ID | 5171092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 652247 |
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| End bp | 653737 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563155 |
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| Product | L-arabinose isomerase |
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| Protein accession | YP_001244244 |
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| Protein GI | 148269784 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2160] L-arabinose isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0388449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGATC TCAAGCAGTA CGAGTTCTGG TTTCTCGTCG GAAGTCAGTA TCTTTACGGT
CTGGAAACCC TGAAAAAGGT GGAACAACAG GCAAGTAAGA TCGTGGATTC ACTGAACGAT
GACCCCATCT TCCCTTCAAA GATCGTTCTG AAGCCGGTTT TGAAGAGTTC TTCTGAAATC
ACAGAAATCT TTGAGAAAGC AAACGCAGAC CCCAAATGCG CAGGGGTTAT CGTTTGGATG
CACACTTTTT CCCCATCGAA GATGTGGATA CGGGGACTCT CTATAAACAA AAAACCCCTG
CTTCACCTTC ACACGCAGTA CAACAGAGAG ATTCCATGGG ATACGATCGA TATGGATTAC
ATGAACCTGA ACCAGTCTGC ACACGGAGAC AGAGAGCATG GGTTCATACA TGCAAGGATG
AGACTTCCAA GGAAAGTTGT GGTGGGACAC TGGGAAGAGA AAGAAGTCAG AGAAAAGATC
GCAAAGTGGA TGAGAGTGGC CTGTGCGATA CAGGATGGAA GAACGGGACA GATAGTCAGG
TTCGGCGACA ACATGAGAGA AGTCGCCAGC ACCGAAGGTG ACAAGGTAGA AGCCCAGATA
AAACTCGGCT GGTCCATAAA CACATGGGGA GTTGGAGAAC TTGCAGAGAG AGTGAAAGCC
GTTCCGGACA ACGAGGTAGA GGAACTTCTC ACAGAATACA GAGAAAAATA CATCATGCCA
GAGGATGAAT ACAGTCTCAA GGCAATAAGA GAGCAGGCGA AAATAGAAAT TGCTCTGAGA
GAATTTTTGA AAGAAAAGAA CGCTATTGCC TTCACCACCA CGTTCGAGGA CCTGCACGAT
CTTCCACAGC TTCCCGGGCT CGCGGTCCAG AGACTCATGG AGGAAGGATA CGGTTTTGGT
GCAGAAGGTG ACTGGAAAGC AGCGGGATTG GTTAGAGCCA TCAAGGTAAT GGGAACGGGT
CTTCCCGGCG GAACTTCCTT TATGGAAGAC TACACTTACC ACCTCACTCC CGGAAACGAA
CTCGTTTTAG GGGCTCACAT GCTCGAGGTA TGTCCAACGA TAGCAAAGGA AAAACCACGA
ATAGAGGTTC ACCCTCTCAG CATCGGCGGG AAAGCAGATC CTGCCCGTCT TGTCTTCGAC
GGTCAGGAAG GACCAGCCGT TAACGCATCG ATCGTTGACA TGGGTAACAG GTTCAGACTC
GTTGTGAACA AGGTTTTATC CGTTCCCATA GAGAGGAAGA TGCCAAAACT CCCAACAGCC
AGGGTCCTTT GGAAACCGCT GCCTGATTTC AAGAGGGCCA CTACTGCATG GATACTCGCT
GGAGGATCAC ACCACACTGC CTTTTCAACA GCCATTGACG TGGAATACCT CATCGACTGG
GCGGAGGCAT TGGAAATCGA ATACGTCGTC ATCGATGAGA ATTTGGATCT CGAGGACTTC
AAAAAAGAAC TGAGATGGAA CGAACTCTAC TGGGGGCTTT TAAAAAGATG A
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| Protein sequence | MIDLKQYEFW FLVGSQYLYG LETLKKVEQQ ASKIVDSLND DPIFPSKIVL KPVLKSSSEI
TEIFEKANAD PKCAGVIVWM HTFSPSKMWI RGLSINKKPL LHLHTQYNRE IPWDTIDMDY
MNLNQSAHGD REHGFIHARM RLPRKVVVGH WEEKEVREKI AKWMRVACAI QDGRTGQIVR
FGDNMREVAS TEGDKVEAQI KLGWSINTWG VGELAERVKA VPDNEVEELL TEYREKYIMP
EDEYSLKAIR EQAKIEIALR EFLKEKNAIA FTTTFEDLHD LPQLPGLAVQ RLMEEGYGFG
AEGDWKAAGL VRAIKVMGTG LPGGTSFMED YTYHLTPGNE LVLGAHMLEV CPTIAKEKPR
IEVHPLSIGG KADPARLVFD GQEGPAVNAS IVDMGNRFRL VVNKVLSVPI ERKMPKLPTA
RVLWKPLPDF KRATTAWILA GGSHHTAFST AIDVEYLIDW AEALEIEYVV IDENLDLEDF
KKELRWNELY WGLLKR
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