Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0643 |
Symbol | |
ID | 5170328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 646998 |
End bp | 648860 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563150 |
Product | hypothetical protein |
Protein accession | YP_001244239 |
Protein GI | 148269779 |
COG category | [S] Function unknown |
COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000119693 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGAA TCGTAGAAGT TTCCAAAAGC CCTTATGCAA AGCTCAAAAC GATACCTGTC GGTTCTGTGA AGGTAGATGG ATTCATGGGT AAATACATTG AAACTCTCGT CAACGTGACT CTTCCCACAC AGTACGATCT TCTGGAAAGC ACGGGAAGGC TCGACAACTT CAGAATCGCT GCTGGAAAGA TGGAAGGATC TTACAAAACA TTTTTTCCGT TCGACGACAC AGACGTGTAC AAATGGACTG AGGCAGTGTC CTTCGCTTTA GCGAACAGGA AACTTCCGGA GCTGGAGAAG ATCCTTGACA GCGTGATAGA AGAGGTGAAA GCTGCTCAGG ATGAAGACGG TTACCTTGGA ACCTATCTTT CTGGAGAGAG AAAAAAAGAG CGATGGACGA ACCTTGCGTG GAATCATGAG TTGTACAACG CAGGTCATTT GATTCAGGCT GCCGTTGCGC ACAGAAGAGT GACAGGAAAG AACTTCCTCT TTGAAGTGGC AAAAAGATTC GCAGATCACA TTTGCAACAC TTTCGGTCCT GGAAAAAAAG AAGGGGCACC GGGGCATCCT GAAGTGGAAA TGGCACTTGT AGAGCTCTAC AGAGAAACAG GAGACAGAAA ATATTTGGAC CTTGCAAGGT ACTTCATTTA CGCACGTGGA AAAGGGCTTG CCAGCGTCCC AAGAAATCCT GGACCAGAGT ACTTCATCGA TCACAAACCT TTTGTGGAGC TAGAAGAGAT CACAGGCCAT GCGGTGAGAG CTCTGTATCT CTGCTCTGGT GCTACCGATC TTTATCTTGA AACAGGTGAT GAAAAGATCT GGCAGGCCCT CAACAGACTC TGGGAGAATT TTGTGACGAA GAAGATGTAC ATCACAGGAG GAGCGGGCTC CAGGCACGAC TGGGAATCCT TCGGAGAAGA GTACGAGCTT TCAAACAGAA GATCTTACGC TGAGTCCTGT GCTTCAATAG CGAATTTCAT GTGGAACTTC AGGATGCTTC TTGCAACAGG TGAGGGAAAA TTTGCAGATG TGATGGAACA GGTTCTGTAC AACGGACTTC TCTCCGGTAT ATCCCTCGAT GGGAAGCACT ACTTTTACTT CAATCCACTT GAAGACCTCG GAAGAACAAG AAGGCAGAAA TGGTTCGACT GTGCGTGTTG CCCACCAAAC CTTGCCAGGT TCATAGCTTC TTTCCCGGGA TACATGTACA CTACATCGGA CGATGGTGTA CAGGTTCATC TGTACGAGAA AAGCACATCG AAGCTGAATT TCAAGAACTC AGTTGTGGAG ATAGAACAGG AAACGGACTA TCCATGGAGT GGGGAAGTGA CCTTCACCGT TGAAACGGAC ATTGAAGAAC CGTTCTCCAT ATCTCTCAGG ATTCCTTCCT GGGCAGATGA TTTTGTTCTC AGGGTGGACG GAAAAACGGT GACAGCAAAT CCGCAGAACG GCTATGTGAA ATTGAGCCAG AGCTGGAAAG GAAAACACAC GGTGGAACTC TCACTTCCTA TGAAAGTGGA GTTCATCGAA GCACATCCCT TCGTGAGAGA CAACCTTGAA AAGGTTGCAG TGAGAAGAGG CCCCGTTGTC TACTGTATAG AACAAGCAGA TAACCCGGAT TTTCATGTTT GGACACTGGT TCTGAATTCG GAGAACCTGA AAGAAGAAAA AGGGAAGATA CTGGACAGAG AGGCCGTTTT CCTCAAAGGG ACTGGAAGAG CATTGGACGT TTCTGAGTGG GAGGGGAAAC TGTACAGGAG GCTGACTGAA GCCAGGAAAA AGACAGTAGA GTTCACTCTC GTTCCTTATC ACATGTGGGC TAACAGAGAA CCGGGTCCTA TGGCGGTGTG GTTGAAGAAA TGA
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Protein sequence | MSRIVEVSKS PYAKLKTIPV GSVKVDGFMG KYIETLVNVT LPTQYDLLES TGRLDNFRIA AGKMEGSYKT FFPFDDTDVY KWTEAVSFAL ANRKLPELEK ILDSVIEEVK AAQDEDGYLG TYLSGERKKE RWTNLAWNHE LYNAGHLIQA AVAHRRVTGK NFLFEVAKRF ADHICNTFGP GKKEGAPGHP EVEMALVELY RETGDRKYLD LARYFIYARG KGLASVPRNP GPEYFIDHKP FVELEEITGH AVRALYLCSG ATDLYLETGD EKIWQALNRL WENFVTKKMY ITGGAGSRHD WESFGEEYEL SNRRSYAESC ASIANFMWNF RMLLATGEGK FADVMEQVLY NGLLSGISLD GKHYFYFNPL EDLGRTRRQK WFDCACCPPN LARFIASFPG YMYTTSDDGV QVHLYEKSTS KLNFKNSVVE IEQETDYPWS GEVTFTVETD IEEPFSISLR IPSWADDFVL RVDGKTVTAN PQNGYVKLSQ SWKGKHTVEL SLPMKVEFIE AHPFVRDNLE KVAVRRGPVV YCIEQADNPD FHVWTLVLNS ENLKEEKGKI LDREAVFLKG TGRALDVSEW EGKLYRRLTE ARKKTVEFTL VPYHMWANRE PGPMAVWLKK
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