Gene Tpet_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0643 
Symbol 
ID5170328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp646998 
End bp648860 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content47% 
IMG OID640563150 
Producthypothetical protein 
Protein accessionYP_001244239 
Protein GI148269779 
COG category[S] Function unknown 
COG ID[COG3533] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000119693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAA TCGTAGAAGT TTCCAAAAGC CCTTATGCAA AGCTCAAAAC GATACCTGTC 
GGTTCTGTGA AGGTAGATGG ATTCATGGGT AAATACATTG AAACTCTCGT CAACGTGACT
CTTCCCACAC AGTACGATCT TCTGGAAAGC ACGGGAAGGC TCGACAACTT CAGAATCGCT
GCTGGAAAGA TGGAAGGATC TTACAAAACA TTTTTTCCGT TCGACGACAC AGACGTGTAC
AAATGGACTG AGGCAGTGTC CTTCGCTTTA GCGAACAGGA AACTTCCGGA GCTGGAGAAG
ATCCTTGACA GCGTGATAGA AGAGGTGAAA GCTGCTCAGG ATGAAGACGG TTACCTTGGA
ACCTATCTTT CTGGAGAGAG AAAAAAAGAG CGATGGACGA ACCTTGCGTG GAATCATGAG
TTGTACAACG CAGGTCATTT GATTCAGGCT GCCGTTGCGC ACAGAAGAGT GACAGGAAAG
AACTTCCTCT TTGAAGTGGC AAAAAGATTC GCAGATCACA TTTGCAACAC TTTCGGTCCT
GGAAAAAAAG AAGGGGCACC GGGGCATCCT GAAGTGGAAA TGGCACTTGT AGAGCTCTAC
AGAGAAACAG GAGACAGAAA ATATTTGGAC CTTGCAAGGT ACTTCATTTA CGCACGTGGA
AAAGGGCTTG CCAGCGTCCC AAGAAATCCT GGACCAGAGT ACTTCATCGA TCACAAACCT
TTTGTGGAGC TAGAAGAGAT CACAGGCCAT GCGGTGAGAG CTCTGTATCT CTGCTCTGGT
GCTACCGATC TTTATCTTGA AACAGGTGAT GAAAAGATCT GGCAGGCCCT CAACAGACTC
TGGGAGAATT TTGTGACGAA GAAGATGTAC ATCACAGGAG GAGCGGGCTC CAGGCACGAC
TGGGAATCCT TCGGAGAAGA GTACGAGCTT TCAAACAGAA GATCTTACGC TGAGTCCTGT
GCTTCAATAG CGAATTTCAT GTGGAACTTC AGGATGCTTC TTGCAACAGG TGAGGGAAAA
TTTGCAGATG TGATGGAACA GGTTCTGTAC AACGGACTTC TCTCCGGTAT ATCCCTCGAT
GGGAAGCACT ACTTTTACTT CAATCCACTT GAAGACCTCG GAAGAACAAG AAGGCAGAAA
TGGTTCGACT GTGCGTGTTG CCCACCAAAC CTTGCCAGGT TCATAGCTTC TTTCCCGGGA
TACATGTACA CTACATCGGA CGATGGTGTA CAGGTTCATC TGTACGAGAA AAGCACATCG
AAGCTGAATT TCAAGAACTC AGTTGTGGAG ATAGAACAGG AAACGGACTA TCCATGGAGT
GGGGAAGTGA CCTTCACCGT TGAAACGGAC ATTGAAGAAC CGTTCTCCAT ATCTCTCAGG
ATTCCTTCCT GGGCAGATGA TTTTGTTCTC AGGGTGGACG GAAAAACGGT GACAGCAAAT
CCGCAGAACG GCTATGTGAA ATTGAGCCAG AGCTGGAAAG GAAAACACAC GGTGGAACTC
TCACTTCCTA TGAAAGTGGA GTTCATCGAA GCACATCCCT TCGTGAGAGA CAACCTTGAA
AAGGTTGCAG TGAGAAGAGG CCCCGTTGTC TACTGTATAG AACAAGCAGA TAACCCGGAT
TTTCATGTTT GGACACTGGT TCTGAATTCG GAGAACCTGA AAGAAGAAAA AGGGAAGATA
CTGGACAGAG AGGCCGTTTT CCTCAAAGGG ACTGGAAGAG CATTGGACGT TTCTGAGTGG
GAGGGGAAAC TGTACAGGAG GCTGACTGAA GCCAGGAAAA AGACAGTAGA GTTCACTCTC
GTTCCTTATC ACATGTGGGC TAACAGAGAA CCGGGTCCTA TGGCGGTGTG GTTGAAGAAA
TGA
 
Protein sequence
MSRIVEVSKS PYAKLKTIPV GSVKVDGFMG KYIETLVNVT LPTQYDLLES TGRLDNFRIA 
AGKMEGSYKT FFPFDDTDVY KWTEAVSFAL ANRKLPELEK ILDSVIEEVK AAQDEDGYLG
TYLSGERKKE RWTNLAWNHE LYNAGHLIQA AVAHRRVTGK NFLFEVAKRF ADHICNTFGP
GKKEGAPGHP EVEMALVELY RETGDRKYLD LARYFIYARG KGLASVPRNP GPEYFIDHKP
FVELEEITGH AVRALYLCSG ATDLYLETGD EKIWQALNRL WENFVTKKMY ITGGAGSRHD
WESFGEEYEL SNRRSYAESC ASIANFMWNF RMLLATGEGK FADVMEQVLY NGLLSGISLD
GKHYFYFNPL EDLGRTRRQK WFDCACCPPN LARFIASFPG YMYTTSDDGV QVHLYEKSTS
KLNFKNSVVE IEQETDYPWS GEVTFTVETD IEEPFSISLR IPSWADDFVL RVDGKTVTAN
PQNGYVKLSQ SWKGKHTVEL SLPMKVEFIE AHPFVRDNLE KVAVRRGPVV YCIEQADNPD
FHVWTLVLNS ENLKEEKGKI LDREAVFLKG TGRALDVSEW EGKLYRRLTE ARKKTVEFTL
VPYHMWANRE PGPMAVWLKK