| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0637 |
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| Symbol | |
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| ID | 5171170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 641028 |
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| End bp | 642443 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563144 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001244233 |
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| Protein GI | 148269773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000622549 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTC TTTTTCTGAT GATTACGCTA ACAGCATTGA CAGGTTATAT TCTCGCCGAC
GAACAACCCA CCTTTCGATG GGCAGTAGTA CATGATCCAT CAATTATTAA GGTAGGAAAC
ATGTATTACG TTTTTGGAAC ACATCTTCAA GTCGCAAAAT CGAAAGATCT AATGCATTGG
GAACAAATAA ATACGAGTGC TCATGACAAG AACCCCATCA TTCCTAATAT AAATGAAGAG
CTAAAGGAAA CCCTGAGTTG GGCAAGGACT CGAAACGACA TCTGGGCGCC TCAGGTTATC
CAACTTTCCG ATGGAAGATA CTACATGTAT TACTGCGCTT CCACCTTTGG TTCACCAAGA
TCTGCCATAG GAATCGCAGT CTCCGATGAT ATAGAAGGTC CGTATAAACA TTACGCAGTT
ATTGTGAAAT CCGGTCAGGT GTATTCTGTG GACGGTCCGA GTGAAGATGG GACACCATAC
GACTCCAGAA AACATCCCAA TGCACTCGAT CCTGGCGTTT TTTATGATAA AGAAGGGAAT
TTGTGGATGG TTTACGGGTC CTGGTTTGGA GGAATTTATA TTTTAAAGCT CGATCCTAAC
ACAGGCCTTC CCCTTCCTGG ACAGGGTTAT GGTAAAAGGT TAGTGGGTGG AAATCACAGT
TCCATGGAGG GGCCATACAT CCTTTACAGT CCTGATACAG ATTATTACTA TCTCTTTCTG
AGTTTTGGGG GCCTTGATTA CAGAGGAGGA TACAACATCA GAGTTGCAAG ATCCAAGAAC
CCAAACGGAC CTTACTACGA TCCCGAGGGA AAGAGTATGG AAAACTGTAT GGGAAGTAAA
ACAGTGATAT CAAATTATGG GGCAAAGTTA GTTGGTAATT TTATCTTGAG TGAGAGTAAT
ACTATCGATT TCAAAGCTTT TGGATACGTA TCTCCTGGAC ACAACTCTGC CTATTACGAT
CCAGAAACTG GGAAGTACTT CATCTTCTTC CACACGAGGT TCCCCGGTAG AGGAGAGACC
TACCAGCTCA GGGTCCACCA GCTTTTCCTC AACGAAGATG GGTGGTTTGT TATGGCTCCA
TTCCCATATG GTGGCGAAAC AGTCTCAAAA TTGCCCAATG AAGAAATAGT AGGTGAATAT
CAGTTCATTA ATCATGGGAA GGAGATAACC GATAAAATCA AACAGCCTGT GAGAATAAAA
CTAAACAGCG ATGGAAGCAT AACCGGAGCT GTCGAAGGAA GGTGGGAGAG AAAGGAACAC
TACATTACCT TGAAAATCAT CGAAGGAAAT ACAACTGTTA TTTACAAAGG AGTACTCCTG
AAACAGTGGC ATTATTCGGA GAAAAAATGG GTGACGGTGT TTACAGCTCT TTCCAACCAA
GGAGTTTCTG TGTGGGGAAT AAGAGTGGAA GAATGA
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| Protein sequence | MRFLFLMITL TALTGYILAD EQPTFRWAVV HDPSIIKVGN MYYVFGTHLQ VAKSKDLMHW
EQINTSAHDK NPIIPNINEE LKETLSWART RNDIWAPQVI QLSDGRYYMY YCASTFGSPR
SAIGIAVSDD IEGPYKHYAV IVKSGQVYSV DGPSEDGTPY DSRKHPNALD PGVFYDKEGN
LWMVYGSWFG GIYILKLDPN TGLPLPGQGY GKRLVGGNHS SMEGPYILYS PDTDYYYLFL
SFGGLDYRGG YNIRVARSKN PNGPYYDPEG KSMENCMGSK TVISNYGAKL VGNFILSESN
TIDFKAFGYV SPGHNSAYYD PETGKYFIFF HTRFPGRGET YQLRVHQLFL NEDGWFVMAP
FPYGGETVSK LPNEEIVGEY QFINHGKEIT DKIKQPVRIK LNSDGSITGA VEGRWERKEH
YITLKIIEGN TTVIYKGVLL KQWHYSEKKW VTVFTALSNQ GVSVWGIRVE E
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