| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0624 |
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| Symbol | |
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| ID | 5171741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 623278 |
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| End bp | 625071 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563131 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_001244220 |
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| Protein GI | 148269760 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGA TCAGAAGAAG GCCACACGGA CCAATTTTAG AAAAACCCGC ACTGAAAAAT
CCCACGGCCA CGTTGAGAAG ACTCCTCGGT TATCTGAGAC CTCACACTTT CACTTTGATC
ATGGTCTTTG TTTTCGTCAC CGTTTCTTCC ATACTTGGTG TTCTCTCACC GTATCTCATA
GGAAAAACGA TCGATGTTGT CTTCGTTCCA AGAAAATTCG ATCTTCTTCC CAGATACATG
CTGATTCTCG GAACGATTTA CGCGCTTACG TCTCTTCTCT TCTGGCTTCA GGGAAAGATC
ATGCTAACTC TTTCTCAGGA TGTTGTTTTT CGTTTGAGAA AGGAGCTTTT CGAGAAGCTT
CAAAGAGTTC CGGTCGGCTT CTTCGACAGA ACACCTCACG GAGACATCAT AAGCAGAGTC
ATAAACGATG TGGACAATAT AAACAACGTT CTTGGAAACA GTATCATTCA GTTCTTCTCG
GGAATTGTGA CACTCGCAGG CGCTGTGATC ATGATGTTCA GAGTGAATGT GATCCTTTCA
CTCGTCACAC TCTCAATAGT TCCCTTGACC GTTCTCATTA CACAGATCGT CTCCAGCCGA
ACCAGAAAAT ACTTTTATGA AAATCAAAGA ATTCTCGGTC AGCTCAATGG GATCATAGAA
GAAGACATCT CCGGCCTCAC TGTGATAAAA CTCTTCACCC GTGAGGAAAA AGAGATGGAG
AAGTTCGACC GGGTGAACGA GAGTCTCAGA AAGGTGGGAA CGAAGGCTCA GATCTTTTCA
GGTGTTCTCC CCCCTCTGAT GAACATGGTC AACAACCTCG GATTTGCCCT GATCAGCGGT
TTTGGAGGAT GGCTCGCCTT GAAAGACATA ATCACAGTGG GTACCATAGC CACCTTCATA
GGCTACTCGA GGCAGTTCAC AAGACCGTTG AACGAGCTTT CTAACCAGTT CAACATGATC
CAGATGGCGC TTGCGAGTGC TGAAAGAATC TTTGAGATTC TCGATCTGGA GGAAGAAAAA
GACGATCCTG ATGCTGTGGA ACTGAGGGAA GTCAGAGGAG AAATCGAGTT CAGGAACGTG
TGGTTCTCCT ACGACAAGAA AAAGCCCGTT CTCAAAGACA TAACCTTTCA CATAAAACCG
GGTCAGAAGG TTGCACTGGT GGGTCCCACA GGGTCCGGAA AGACGACGAT CGTGAATCTG
TTGATGAGAT TCTACGACGT GGACAGAGGG CAGATCCTCG TGGATGGTAT AGATATAAGA
AAAATAAAGA GGAGTTCTCT GAGATCCAGC GTAGGCATCG TCCTTCAGGA TACTATTTTG
TTTTCCACCA CCGTGAAAGA AAACCTCAAA TACGGAAATC CTGACGCTAC CGACGAAGAA
ATAAAAGAAG CAGCGAAACT GACACATTCC GACCACTTCA TAAAACACCT GCCTGAGGGT
TACGAAACGG TCCTCACCGA CAACGGTGAA GATCTGAGTC AGGGTCAAAG ACAGCTTCTT
GCCATAACAA GAGCTTTCCT TGCGAATCCA AAGATCCTGA TACTGGACGA AGCCACCAGC
AACGTTGACA CAAAGACGGA GAAAAGCATA CAGGCAGCCA TGTGGAAACT CATGGAGGGG
AAGACCAGCA TCATCATAGC TCACAGATTG AACACGATAA AAAACGCAGA TCTGATCATC
GTTTTAAGAG ACGGAGAAAT TGTGGAGATG GGAAAACACG ATGAGTTGAT TCAAAAGCGA
GGCTTTTATT ACGAGCTCTT CACAAGCCAA TACGGTCTCG TTGTAGAAAG ATAA
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| Protein sequence | MPEIRRRPHG PILEKPALKN PTATLRRLLG YLRPHTFTLI MVFVFVTVSS ILGVLSPYLI
GKTIDVVFVP RKFDLLPRYM LILGTIYALT SLLFWLQGKI MLTLSQDVVF RLRKELFEKL
QRVPVGFFDR TPHGDIISRV INDVDNINNV LGNSIIQFFS GIVTLAGAVI MMFRVNVILS
LVTLSIVPLT VLITQIVSSR TRKYFYENQR ILGQLNGIIE EDISGLTVIK LFTREEKEME
KFDRVNESLR KVGTKAQIFS GVLPPLMNMV NNLGFALISG FGGWLALKDI ITVGTIATFI
GYSRQFTRPL NELSNQFNMI QMALASAERI FEILDLEEEK DDPDAVELRE VRGEIEFRNV
WFSYDKKKPV LKDITFHIKP GQKVALVGPT GSGKTTIVNL LMRFYDVDRG QILVDGIDIR
KIKRSSLRSS VGIVLQDTIL FSTTVKENLK YGNPDATDEE IKEAAKLTHS DHFIKHLPEG
YETVLTDNGE DLSQGQRQLL AITRAFLANP KILILDEATS NVDTKTEKSI QAAMWKLMEG
KTSIIIAHRL NTIKNADLII VLRDGEIVEM GKHDELIQKR GFYYELFTSQ YGLVVER
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