| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0609 |
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| Symbol | |
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| ID | 5171335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 605735 |
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| End bp | 608029 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563117 |
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| Product | alpha-xylosidase YicI |
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| Protein accession | YP_001244206 |
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| Protein GI | 148269746 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.283089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCA CAGAAGGGCT GTGGAGATTG AGAGAAGGGG TACAGCTGTT CAAACCAGAA
CAGGTGTACG AATACTCCTG CGATGGAAAA AGATTGATCC TTCGATCGCC GTTTCAGAGG
GTGGAGCACC GGGGACAGAC GCTTCAGGGT CCGGTCTTCG AGATCGAGAT CTCCTCTCCG
TTTGAAAACG TAATAAGAAT TCGGTTCAGA CATTTCAAGG GAGTACTCGA AAAGTCACCG
TACTACGAAA TCCACCAGGA TGAAAGCTTC ACACCGGATA TCAAAGAAAC AGAAGGAAGT
TTTATCTTCA CCTCAGGAAA GGTAAAAGCG ATCATAAGGA AGAATCCTCT CAAGATGGAA
TTCTTCTACG AAGATCGTTT CCTCACGAAA TCGGATCTGG GATACGCCGT GGCACCAGAA
GGGAGGTTCT GTCTTGAAAG ACTTCATCTG AGTGTGGGAG AGATGATCTA CGGTCTCGGA
GAAAGATTCT CACCTTTCGT CAAAAACGGT CAGAGAGTTG TCATGTGGAA CGAGGACGCC
GGAACGATCT CCGATATGAC CTACAAGAAC ATCCCGTTCT ATGTGAGCAG CAGAAAGTAC
GGTGTCTTCG TGAACGATCC TGGAAAGGTG GACTTCGAAA TTGCAACAGA ACATGTGGAA
AAGGTGCAGT TCAGTGTGAA AGGAGAGACT CTGGACTATT TCATCATCGC TGGAAAAGAT
CTGAAAGAAG TTCTGGAACG CTACACACTT CTCACAGGAC GGCCAGAACT TCCTCCTGGC
TGGAGCTTTG GACTCTGGCT CACCACATCC TTCACCACAC AGTACGATGA GAGAACTGTG
ATGGAGTTCG TGGATGGCAT GAGAGAACGT GACATACCCC TTCATGTCTT TCACTTCGAC
TGCTTCTGGA TGAAGGAGTT TCACTGGGTG GATCTTGAGT GGAACAGGGA GAACTTCCCC
GACCCTGAAG GGTTGTTGAA ACGCCTCAAA GAGAAGGGAC TGAAGGTGTG CGTCTGGATA
AACCCCTATG TCTCTCAGTT TTCGAGTCTC TTTGACGAGG GAAAAGAAAA GGGCTATTTC
CTGAAAAAAC CAGACGGAGA TGTCTGGCAG ACGGACGACT GGCAACCAGG AATGGCGATC
ATCGATTTCA CGAATCCAGA AGCCAGAAAG TGGTTCGCTT CAAAACTGGA AAGATTGATA
GATATGGGGG TTGACTGTTT CAAGACGGAC TTTGGAGAGA GAATCCCCAC AGATGTGGTC
TATTACGACG GATCCGATCC TGAGAAAATG CACAACTACT ACACCTATCT GTACAACAAA
ACCGTCTTTG AAACTCTGGA GAGAAAACTC GGAAAGAGAA ACGCTGTCGT CTTCGCGCGG
TCTGCAACGG CAGGGAGTCA GAAATTCCCG GTCCACTGGG GAGGAGATTG TCTGGCTTCC
TATGAGTCCA TGGCGGAAAC CCTGAGAGGG GGTCTTTCTC TCGCACTGTG CGGTTTCGGT
TTCTGGAGTC ACGACATCGG AGGATTCGAG GACATCACAA CACCGGATCT GTACAAGAGA
TGGGTGGCAT TCGGTCTTCT GTCATCTCAC AGCAGGCTCC ACGGAAATTC GATGTACAAG
GTTCCCTGGA ACTTCGATGA AGAAGCGGTG GAGGTGCTCA GATTTTTCAC GAAACTGAAG
TGCAAGCTCA TGCCCTATAT ATTCGCCAGC GCAGTCGAAG TACATGAGAG GGGAATCCCT
GTCACGAGAC CCATGATTTT TGAGTTTCCA GACGATCCCA CCTGTCTCTA TCTGGACAGA
CAGTACATGC TGGGAGAATC ACTCCTTGTC GCTCCGATCT TCAGCGAGAC GGGAGAGGTA
ACCTACTACC TTCCAGAGGG AGTCTGGACT CACTTTCTCA CCGGTGAGAG GATAGAAGGA
GGAAGATGGA GAACAGAAAA ATACGACTAC TTCGGGCTTC CACTCTTTGT GAGACCAAAC
TCCGTAATTC CAGCAGGGTC CGTCGATGAC AGGCCGGATT ACGATTACGC AGACGGTGTC
ACATTGAACG TTTTTGAAAT TTCAAACAAA ACAGCGCATG TTTACAACAC ACGGGACGAG
GTGGAATTGA GTGTGAAAGT AGAGAGAAGA GAAAACGAGA TACACGTTGA GGTCCTGAAG
GACTCCGGAA AACCATGGAA GCTGCTGTTC TGGAACGAAA GGCTTGAAGC TGTGGAAGGC
GCTGAGACAA GAGAACTAGA AAAAGGAACA GAGGTGGTTC TCAGCTTCCA GAGAGCGATT
TTAAAGACAA AATGA
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| Protein sequence | MRFTEGLWRL REGVQLFKPE QVYEYSCDGK RLILRSPFQR VEHRGQTLQG PVFEIEISSP
FENVIRIRFR HFKGVLEKSP YYEIHQDESF TPDIKETEGS FIFTSGKVKA IIRKNPLKME
FFYEDRFLTK SDLGYAVAPE GRFCLERLHL SVGEMIYGLG ERFSPFVKNG QRVVMWNEDA
GTISDMTYKN IPFYVSSRKY GVFVNDPGKV DFEIATEHVE KVQFSVKGET LDYFIIAGKD
LKEVLERYTL LTGRPELPPG WSFGLWLTTS FTTQYDERTV MEFVDGMRER DIPLHVFHFD
CFWMKEFHWV DLEWNRENFP DPEGLLKRLK EKGLKVCVWI NPYVSQFSSL FDEGKEKGYF
LKKPDGDVWQ TDDWQPGMAI IDFTNPEARK WFASKLERLI DMGVDCFKTD FGERIPTDVV
YYDGSDPEKM HNYYTYLYNK TVFETLERKL GKRNAVVFAR SATAGSQKFP VHWGGDCLAS
YESMAETLRG GLSLALCGFG FWSHDIGGFE DITTPDLYKR WVAFGLLSSH SRLHGNSMYK
VPWNFDEEAV EVLRFFTKLK CKLMPYIFAS AVEVHERGIP VTRPMIFEFP DDPTCLYLDR
QYMLGESLLV APIFSETGEV TYYLPEGVWT HFLTGERIEG GRWRTEKYDY FGLPLFVRPN
SVIPAGSVDD RPDYDYADGV TLNVFEISNK TAHVYNTRDE VELSVKVERR ENEIHVEVLK
DSGKPWKLLF WNERLEAVEG AETRELEKGT EVVLSFQRAI LKTK
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