| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0578 |
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| Symbol | |
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| ID | 5171342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 576987 |
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| End bp | 578228 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563085 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001244175 |
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| Protein GI | 148269715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0133344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATGAGC TCTTACACTG GAAGAGGAAC TTCTTCCTTC TTGCCCTCGG AAGGTTCGTA
TCGATTCTTG GAAGTTCCAT TCAGGCGGTT GCGATTCCTC TTTTTGTACT GGATCTGACA
CACTCTGGAT CTGCTGTTGC CCTGATGACC GTAGCCTACA TGGTTCCGAG GATCCTTTTC
ACACCCATAG CCGGGATCGT GGGAGACAGG GGAGATAGAA AGTTTCTCAT GGTCTCGATG
GATTTTCTGA GGGGATTTCT CATCTGTTTT CTGGCCCTTC TTGCGTTCAG AAACTCCGTC
ACCCTTCCCG TTCTCTACGT TTCTCAGATA GCGATGGCTG TCATGGACAA TCTCTTCGAC
ATACCGACAG GTGCGATGTT TCCCGATATC GTTCCTCAGG ATTTTCTCAT GAGAGCCAAC
TCCATCATGG GTATGGTGAG GATCTTTCCA CAGATCCTGG GCCCCGCACT GGGAGGAGTG
ATCTACGGAT TCTACGGTAT AGCGATCGTT TTTCTTGTGA ATGGGGTGTC TTTTGTCCTC
TCTGCTATCA GTGAGATCTT CATCGTTTAC AGCCGAAAGG TGGAGAAAAA GCCAGCAAAA
TTCTCTCAGA TCCTTGAAGA TCTCAAAGAA GGATTTCTCT TCATCTGGAA CCACGAGCTC
ATACGAACCA TTCTGATCTT CGCACTTTTT CTGAATCTGC TCATCTCTCC GCTGTTCATG
GTGGTGTATC CTTACACGAT CAGGGAAGTG ATGAAATTTT CGGCTCAGGA ATTTGGTTTC
CTGGAGACTT CCTTCACCTT AGGGGCGCTT CTTGGGAACT TTCTGATCGC ATCGTACCTG
TCAAAGAAGA ACATGTGGAA GGCCATGAAG ATTTCTATCT TTCTTTTTGA ACTTCCCATC
GTCTTCCTTG GCTTTCTCGT CATGCCTGAT TTTTCCTTGA ACAGACTGGT TCTTTTCTCG
CTGTTTTTCA TCACGTTCCT GATAATGGGT TTTTTGAATC CCATCATCAA CGTTCCTCTG
GACACGGCGT TTCAAAAGAT GACACCTTCT CACATCAGAG CGAGGGCCTT TTCTTTCCTC
ATTCTCGTAG CAAACGGAGT CACTCCGCTC GGATCGGTTC TCTACGGATA CCTCGTTGAT
AGAGTGCCGG TCCATTTTCT TTACTATATT GTCGGAGCGC TTTCTTTTCT GGTCGCTGTG
CTGCTTCTGG TAGCTTTGAG GGGAAAAGAG CTTCCCACTT GA
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| Protein sequence | MNELLHWKRN FFLLALGRFV SILGSSIQAV AIPLFVLDLT HSGSAVALMT VAYMVPRILF
TPIAGIVGDR GDRKFLMVSM DFLRGFLICF LALLAFRNSV TLPVLYVSQI AMAVMDNLFD
IPTGAMFPDI VPQDFLMRAN SIMGMVRIFP QILGPALGGV IYGFYGIAIV FLVNGVSFVL
SAISEIFIVY SRKVEKKPAK FSQILEDLKE GFLFIWNHEL IRTILIFALF LNLLISPLFM
VVYPYTIREV MKFSAQEFGF LETSFTLGAL LGNFLIASYL SKKNMWKAMK ISIFLFELPI
VFLGFLVMPD FSLNRLVLFS LFFITFLIMG FLNPIINVPL DTAFQKMTPS HIRARAFSFL
ILVANGVTPL GSVLYGYLVD RVPVHFLYYI VGALSFLVAV LLLVALRGKE LPT
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