| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0555 |
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| Symbol | |
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| ID | 5170874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 553805 |
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| End bp | 555454 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563062 |
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| Product | fibronectin-binding A domain-containing protein |
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| Protein accession | YP_001244152 |
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| Protein GI | 148269692 |
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| COG category | [K] Transcription |
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| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00535298 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTCG ATGGGTTGCT TCTGCACAAA GTAGTCAGAG AGTTGAAGGA ACTCGAAGGG
GAACACTTGA GACAGATCTA TCAACCAACG ACGGTTGATT ATTATTTTCT TTTCAAAAGT
GCGACCGTTC GCGTGTGTTT GAGACCCGAC GTTTCCCATG TAGCGATCGC CGAAAAAGAA
GAGGCATCGG AGAAGATGCC TTCTTCGTTC ACAATGCTTC TGAGAAAAGA GCTGAAAGGT
GCGAAACTTC TAAAGATAGA GCAAATTGGA ATGGATAGAA CACTGCGATT TTCCTTTGAA
AAATTCGATG AGATAGAAGG AATCGTTCAA AAAGAGCTCT ACATCGAAAT AATGGGAATT
CACTCGAACA TGATATTGAT CAGAGACGGA AGAATCGTTG ACACACACAG ACGCATCGTA
ACGAAAAAGA GAGAAATCCT TCCCGGCAGG GAGTTCGTGA TTTTCCCCTC TGAAAAAGTT
TCCATTTTCG AATTGAAAGA ATTTCCTCCG GAGAGTGAAA AAACGATCCG AAACGTTCTC
CTTTCACTTC TCGAGGGTTT TTCACCCGCT TCTGTGGAGG AGTTGATCCA CAGAGCCGGT
TACGAGCTGG ATACTCCGTG GAAAGCTGTA GATCAAAAAA AGATACTCGA AGTTCTCGAA
GGAATAAAAA AGGAACTGGA ACTTCCAGGA GTGTTTGTTT ATTACGAAGC TTCACATCCT
TTGGAAGTTT CCGCTTTCAG ATTCACCATG CTGGATCTCA AAGAAAGATA CTTTGAAAAA
CCCTCCGAGG GTATCAACGA ATTTGTGAAA TGGAAAGAAG AAAAATCCAC TTTTGAAAAC
ATCAAACAAC GCCTTATCAA AGTGGTTGTG AGCAGAATCG AAGATCTGGA TGATCTTGAA
GAAAAACTTT CGAGGGAACT TTCTGAAGCG GAGAAAGCCG AAAGATACAA AAAACTCGGC
GATCTCATCG TTCAGAACCT CTGGAGTATA AAGGGAAAAT CCGGAGAGGT CGAACTCACG
GACTGGGAGA CAAACGAAAA GATCGTTGTG GATGTGGGAA AAGATCCTGC CCAGACGGCT
CAGAAGTTCT ACAATACCTA CAAAAAACTG CAGAGAAAGA AAGAACAGGT AGAAAAACGG
CTCGAAGAAA TACAGAGGGA AAAGGAGTAT CTCTATCAGC TGTGGCAGAC GATCGAAGAC
GCGGAAGATT TGGAAACACT CGAAGAGATA GAAGAAGAAA TGAGAGAATT TGGACTTCTG
AAAGAGAAGA AAATGGAAAA ACAAAAATCA AAGAAAACCC GTTTCAGAGA GGTTTATTAC
GATGGATTCA AAATTCTCGT GGGAAGGAAC AACAAACAAA ACGATGAGCT CGTGAAAACT
TCTTCGAAGG AAGACCTGTG GTTTCACGCT CACGAGATGC CGGGAGCTCA CGTTGTGGTG
AAAACGGAAG GAAGGGAGGT GCCTCAAGAG GTTGTGGAGT ACGCGGCGAG TCTCGCGGCC
GGTTACTCAA AGGGAAAAAA TTCCGGGAAA GTGCCAGTCG ATTACACTTT CATAAAGTAT
GTAAGAAAAC CAAAGGGCTT CAAACCCGGT ATGGTGATAT ACACGAACTA CAAAACCATT
CTTGTTGAGC CAAGGAGGAT AGAGGGATGA
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| Protein sequence | MPFDGLLLHK VVRELKELEG EHLRQIYQPT TVDYYFLFKS ATVRVCLRPD VSHVAIAEKE
EASEKMPSSF TMLLRKELKG AKLLKIEQIG MDRTLRFSFE KFDEIEGIVQ KELYIEIMGI
HSNMILIRDG RIVDTHRRIV TKKREILPGR EFVIFPSEKV SIFELKEFPP ESEKTIRNVL
LSLLEGFSPA SVEELIHRAG YELDTPWKAV DQKKILEVLE GIKKELELPG VFVYYEASHP
LEVSAFRFTM LDLKERYFEK PSEGINEFVK WKEEKSTFEN IKQRLIKVVV SRIEDLDDLE
EKLSRELSEA EKAERYKKLG DLIVQNLWSI KGKSGEVELT DWETNEKIVV DVGKDPAQTA
QKFYNTYKKL QRKKEQVEKR LEEIQREKEY LYQLWQTIED AEDLETLEEI EEEMREFGLL
KEKKMEKQKS KKTRFREVYY DGFKILVGRN NKQNDELVKT SSKEDLWFHA HEMPGAHVVV
KTEGREVPQE VVEYAASLAA GYSKGKNSGK VPVDYTFIKY VRKPKGFKPG MVIYTNYKTI
LVEPRRIEG
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