Gene Tpet_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0545 
Symbol 
ID5171638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp541722 
End bp544748 
Gene Length3027 bp 
Protein Length1008 aa 
Translation table11 
GC content46% 
IMG OID640563052 
Productacriflavin resistance protein 
Protein accessionYP_001244142 
Protein GI148269682 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.92729e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCTGTC GGGGAGGGAT CGAAGTGAAG ATCGCGGAAA TCTCTTCGAG AAGACCCATA 
GCCATCTTTA TGCTGTTGAC AGCTGTTGTC TTCCTTGGTT TCATTTCGTT TCAGCATCTC
AAGCTGGATT TTCTTCCTCA GATAGAGTAC CCTTACGCTG TTGTTATAAC CACGTACATG
GGAGCGGGCA CGGAAGAAGT CGAAGAACTC GTAACCAAAC CTCTTGAAGG GTACATTTCC
TCAACTCCGG GTGTTAGAAG GTTCACCTCC ATGTCGATGG ATTCCGTTTC TTTCATCCTC
GTCGAGTTCG ACTGGAATGT GAAAACCTCC GAAGCCGTTG GAAGACTCTC AAGGTACGTA
GATCTTGCCA CTCGCGACCT GCCAGAGGGT GCGAATCCTG TGGTCGTAGA GTTCGATCCT
TCCTTACTTC CCGTGTATGC TTTCTCAACG GAAGATGACT ACGAAGATGT CGTGTCGAAA
ATCAAAAGAC TGCCGGAAGT CGCCAGTGTA GAAGTGATGG GAAAACCAGA AAAAATCGTC
GAGGTTATAC TTGATCAGGA GAAAATAAAA CGGTTCGATG TTGATCCTTC GTTGATAGAG
ACCATCCTTT CAGGGAATCT CGTTTACCCG TTCGGCTATG TGAGCGATTC TGAAGGAAAC
ATTTACCCCG TTTCCGTCGA TGGCCGGTTT GAGAACATAG AAGATCTCAA AAACACAATA
GTTGGTTTCA GGGGAGTGAA ATACCAGTCC CTTCTGCAGG GTAAGGTACC GAACATACTC
GTTCCCGTGA GATTGAGAAA CATAGCCGAG GTTAATATAA CGAACGAAAG CGTTCAGGGA
GAAGTCAGGG TCAACGGAAA GAAGGCTTCT CTCATCGCTA TCTACAAAAG AAGCGGTGCG
AACACCGTCA AAACTGTCCG TGAAATAAAG AGGATACTGA GAGATTCCAA AATAAATTAC
ATAGAGGCCA TGAACCAGGC TTATTACACT GAAAGAGCGA TCGACAATCT TCTCAAGAAT
CTTCTCTACG GCTTCATCGC GGCTTTCGTG GTGGTTTTGA TCTTTTTGAA GGATTTCACG
TCAACCATCG TCACTTCGTT TTCCATTCCG CTGTCCCTCA CGATCACCTT TGTTCTTCTT
TACGCCTTCG GCTTGAACCT CGACACGCTC ACGCTGGGCG GTCTCATCAT GGCACTGGGA
ATGCTGGTGG ACAATTCCAT AGTCGTGTTT GAGAACATAT ACCGCCATCG CTCCCTCGGT
GATCCAATAC CGGACGCTGC GAGAAAAGGT GCGGGAGAGG TGTGGCTGGC GATTCTTGCT
TCCACACTCA CAACCGTTTC TGTTTTTCTT CCCATAGTGT TCTTCACAGG TTTTGTAGTG
AGACTGTTCA AGTATTTCGC CATTGCGTTC GTCTTCGCAC TTTCTTCTTC GCTGTTCGTA
TCTACAGTCG TCGTTCCAGC GGGTACAAGG TGGATAAAGC CAAGAAGAGG AAAACTCACC
GAAGCACTGC AAAAGCATTA TCGGAAGGCA TTGGAATGGT GTTTGAAGAG AAAGAAACTG
GTCCTGGTGA TTTCTTTTGC TCTGGTTGCA ATCTCCGTGA TTTACCTTCT TTCGAAACCT
CTGGGTTTTC TCCCGTCTTT CCAGACGAAT CTCATGGTGA TAGATGTGAA ACTTCCCTCT
CAGTCGTCTT ATGAAAAAAC CACCGAAGCT GTAGAGCAAA TAGAAGATTA CCTGAACAAA
CACAGAAACG AGTACAAAAT CTCTTCTTTC TACTCGGAAG TTGGAATAAC GAATATCTAC
TCTCAAATAA TGGGAAGGGG ACAGAACGAA GCAAGAATAA TGGTGAACCT CGGAGGAAGC
AGGAGGGAAT TCGCGAAAAA CAGAGAGAAA CTGAAGAATG CCATCTCCCA GCTGAACATT
CCAGAAGCGA AAATAGAAGT TCTTGAGCAA TCACAGCAGA TATACGAAAT TCTGGGCTAT
CCTGTGACGA TCGAAGTGAG AGGAGATGAT CTTTCTCTGA TACAGGAAAA AGCAAAAGAA
ATCTTCGAGC GTTTAAGGGA ACTGCAGGAA GTCAAAAAGA TTCAGATAAG AAATTCCTTT
GAAAAGGAAG TCCTTCATGT GAAAATAGAC CGGAACAAAG CCCTCATGAA CGGTGTGGTG
ACAGGCCAGG TCTTTTTGGA TCTCCAGACC TACCTTCTCG GGAAGAAAAT CGGAACACTG
AGAACGGAAG AAGGAACACT TCCCATCGTT TTGAAAAAGG CAAAATCTCT ATCTCCCGAA
GACTTATCGA AGATTTCGCT TACTGGTCTC AAAGGGGATG TCTCTCTTGG TGCAGTTTCA
AACATATCGA GGGAAACACT TCCTTCTATA GTGGAACACT CCGATGGAGA ACGTGTTGTT
TACGTAGATC TGGTGAGTAT AGAAGGTTCG ATCGGCGAAG TTGCAAAGAA AGTAGAAAAT
CTTCTAAATG AAATTGATCT TTCTGGTGTA AAAGTGGAAA TCACCGGACA GAAAAGTTTC
ATGGACGAAG CGTTTTCGGA GCTTCAGTAT GTTGTTTACA TAGCGATCGC ACTCGTATAC
ATGATTCTCG CTGCGCAGTT CGAGTCTTTC ACACTGCCTT TCATTATATT CTTCACCATA
CCCTTCGCTG TCGTTGGGGT TGCCTTCGCG GTTTTCGTGA ACGGATACTC ACTGAATGTA
CCCGTTCTTG TTGGTCTTCT CACCCTTTCG GGAACGGTTG TGAACAACGC CATCGTGATG
CTGACAAGAA TAGAACAGAT AAGACAGGAA AAAGGTCTCT TAGAGGCCAC ACTTGAAGGT
GCTCAGAGCA GGTTGAGACC CATCCTGATG ACCACCTTCA CCACGATCGT TGCGCTTCTA
CCAACTGCAC TTAGCCACGC AGAAGGATCG GAAATAGAGT CTCCAATATC GTGGGTGGTG
ATCTTTGGAA TGCTTATATC CATGCTGTTC ACTTTGTTTG TGATCCCTGT GATCTACACT
GCGATCAGAA GAAAAGTCAG AGTATAG
 
Protein sequence
MFCRGGIEVK IAEISSRRPI AIFMLLTAVV FLGFISFQHL KLDFLPQIEY PYAVVITTYM 
GAGTEEVEEL VTKPLEGYIS STPGVRRFTS MSMDSVSFIL VEFDWNVKTS EAVGRLSRYV
DLATRDLPEG ANPVVVEFDP SLLPVYAFST EDDYEDVVSK IKRLPEVASV EVMGKPEKIV
EVILDQEKIK RFDVDPSLIE TILSGNLVYP FGYVSDSEGN IYPVSVDGRF ENIEDLKNTI
VGFRGVKYQS LLQGKVPNIL VPVRLRNIAE VNITNESVQG EVRVNGKKAS LIAIYKRSGA
NTVKTVREIK RILRDSKINY IEAMNQAYYT ERAIDNLLKN LLYGFIAAFV VVLIFLKDFT
STIVTSFSIP LSLTITFVLL YAFGLNLDTL TLGGLIMALG MLVDNSIVVF ENIYRHRSLG
DPIPDAARKG AGEVWLAILA STLTTVSVFL PIVFFTGFVV RLFKYFAIAF VFALSSSLFV
STVVVPAGTR WIKPRRGKLT EALQKHYRKA LEWCLKRKKL VLVISFALVA ISVIYLLSKP
LGFLPSFQTN LMVIDVKLPS QSSYEKTTEA VEQIEDYLNK HRNEYKISSF YSEVGITNIY
SQIMGRGQNE ARIMVNLGGS RREFAKNREK LKNAISQLNI PEAKIEVLEQ SQQIYEILGY
PVTIEVRGDD LSLIQEKAKE IFERLRELQE VKKIQIRNSF EKEVLHVKID RNKALMNGVV
TGQVFLDLQT YLLGKKIGTL RTEEGTLPIV LKKAKSLSPE DLSKISLTGL KGDVSLGAVS
NISRETLPSI VEHSDGERVV YVDLVSIEGS IGEVAKKVEN LLNEIDLSGV KVEITGQKSF
MDEAFSELQY VVYIAIALVY MILAAQFESF TLPFIIFFTI PFAVVGVAFA VFVNGYSLNV
PVLVGLLTLS GTVVNNAIVM LTRIEQIRQE KGLLEATLEG AQSRLRPILM TTFTTIVALL
PTALSHAEGS EIESPISWVV IFGMLISMLF TLFVIPVIYT AIRRKVRV