Gene Tpet_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0533 
Symbol 
ID5171701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp528479 
End bp529141 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID640563041 
ProductHhH-GPD family protein 
Protein accessionYP_001244131 
Protein GI148269671 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.208461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGA CAGAACTCTA CAGAAAGTTA CTGGAAATAC ACGGATCGGT TGGGAAATGG 
TGGCCCGGAA CACCTGAGGA AATCGCAATA ACTGCCATCC TCACCCAGAA CACGAACTGG 
AAGAACGTTG AACGTGTCAT GGAAAACATC AAAAACGCAG TCAAAGGAAA CAACCTGCTG 
AAAGAACTGG ATTCTCTTCC CGAGGAGAAA GTAGCAGAGC TCATAAGACC AGCGGGGTTC 
TTCAACATCA AAACAAAGCG CCTCAAGGCA CTGTTGAAAT TTCTCAAAGA ATACAACTAC 
AATCTATCTC GTCTGAGAGA TCTTCCAACA CATATTTTAC GAGAAAGACT CCTCAAAATA 
AAAGGCATCG GCAAAGAAAC CGCCGATGCC ATTCTGCTCT ACGCCTTGGA AAAACCGATT 
TTCGTCGTTG ACAGCTACAC AAGAAGACTT TTGAAGAGAA TCTTCAACAT CGAACTGAAC 
GACTACGACG AAGTGCAAAG GCTTTTCATG ACTCACTATC CAGAGGATGT TCGTCTTTAC 
CAGGAGTTTC ACGGGCTTAT CGTGGAACAC GCGAAAAAAT TTTGCAGCAA AACTCCGAAG 
TGCGGTGTCT GCCCTTTAAA GAAAGAGTGC TGCCATGTAT CACAGATGAA TGGGTTTTCC 
TGA
 
Protein sequence
MRLTELYRKL LEIHGSVGKW WPGTPEEIAI TAILTQNTNW KNVERVMENI KNAVKGNNLL 
KELDSLPEEK VAELIRPAGF FNIKTKRLKA LLKFLKEYNY NLSRLRDLPT HILRERLLKI 
KGIGKETADA ILLYALEKPI FVVDSYTRRL LKRIFNIELN DYDEVQRLFM THYPEDVRLY 
QEFHGLIVEH AKKFCSKTPK CGVCPLKKEC CHVSQMNGFS