Gene Tpet_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0530 
Symbol 
ID5171011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp525416 
End bp526747 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content47% 
IMG OID640563038 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001244128 
Protein GI148269668 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000017098 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACG ATGTTGTTGT TGTCGGAGGC GGGCCAGCCG GTCTTGTGGC GGCGTTCACC 
ACAAAGAGAT TCTTTGGAGA CAAAAAAATT CTCGTTATCA AGAAGACCGA GAAAGAAATG
GTACCCTGTG GAATACCGTA CATCTTTCAT ACTCTCGGCA GCGTGGAAAA CGACTACATG
GGAATTGAAG ATCGCTTCAA AAGTGCGGGC ATAGATCTTC TGATAGATGA AGTTGTCGAT
GGAAACCCCG ATGAAAAAAA GCTTCTCGCT AAGAGTGGAA AAGAGATTTC TTACGACAAA
CTCATCATCG CAACCGGCTC TTCACCGAAC ACACCGAAGA TACCAGGTGT GGATCTAAAA
GATGTCTTCA CCGTTCCAAA AGAAGCCGAT TATCTTAAAC TGTTGCACGA GAAGGTAAAG
GGTGCTAAAG ATGTGGTCAT CATCGGAGGT GGTTTCATAG GAGTTGAGGT GGCCGATGAG
ATCAAAAAAT CTGGGAAAAA CGTCACCCTT GTGGAGATAA TGGACAGTCT TCTTCCTGTG
TCGTTCGATC CGGATTTTGG AGAACTCGCG AGAAAGGAAC TCGAATCGGA CAACGTCAAA
GTCCTTACAG GAAGAAAAGT AACAGAGATC CTCGGAACGG AAAAAGTGGA GGGAGTAAAG
CTGGACAGCG GAGAAACGAT CCCGGCCGAT GTGGTCGTGC TCGCAACGGG TTACAGACCA
AATTCCGAAC TCGCAAAGAA ACTCGGACTC AAAGTGACAG AACTTGGTTT CATAGAAACA
GATGAGTACA TGAGAACTTC AAAACCAGAC ATCTTCGCTG CGGGTGACTG TGTGCAACAC
AAAGACTTCC TCACTGGAAA GCCTTCCAGA CTTATGCTTG CCTCCGCTGC TGTTTTTGAT
GCCAGAATTG CAGCGTCCAA TCTGTACGGT TTGAAGGTGA TCAGGACAAA CAAAGGTTCT
CTGAACGCGT ACTCAACCGT CATAGGAAGC AAAGCGTTCG GCTCTGTGGG AATAACGGAG
AGAATAGCGA AGGAAGAAGG ATTCGAAGTT GTCGTTGGAA AGGCGGAAGC ACCGGACAGA
CACCCAGGAA AGTTCGAAGA CACCTCAAAA CTCCTGGTGA AACTTATCTT CTCAGAAGAC
AGCAAGATCC TGCTCGGTGC ACAGGTGTGC GGTGGAAAGA GCGTCGGTGA GATAGTGAAC
CTAATAAGCC TCGGCATACA GAAAGGCATC ACAGCGAACG ATCTCTTCAC CATGCAGATC
GGAACACATC CACTTCTCAC ATCTGCTCCA ACGGTGTATC CATTGGCGAA AGCGGCTGAA
ATGGTATTAT AA
 
Protein sequence
MKYDVVVVGG GPAGLVAAFT TKRFFGDKKI LVIKKTEKEM VPCGIPYIFH TLGSVENDYM 
GIEDRFKSAG IDLLIDEVVD GNPDEKKLLA KSGKEISYDK LIIATGSSPN TPKIPGVDLK
DVFTVPKEAD YLKLLHEKVK GAKDVVIIGG GFIGVEVADE IKKSGKNVTL VEIMDSLLPV
SFDPDFGELA RKELESDNVK VLTGRKVTEI LGTEKVEGVK LDSGETIPAD VVVLATGYRP
NSELAKKLGL KVTELGFIET DEYMRTSKPD IFAAGDCVQH KDFLTGKPSR LMLASAAVFD
ARIAASNLYG LKVIRTNKGS LNAYSTVIGS KAFGSVGITE RIAKEEGFEV VVGKAEAPDR
HPGKFEDTSK LLVKLIFSED SKILLGAQVC GGKSVGEIVN LISLGIQKGI TANDLFTMQI
GTHPLLTSAP TVYPLAKAAE MVL