Gene Tpet_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0528 
Symbol 
ID5170861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp522059 
End bp523279 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content46% 
IMG OID640563036 
Productglycosyl transferase, group 1 
Protein accessionYP_001244126 
Protein GI148269666 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.05595e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGTTG TGTTGAGAGA GCGAAACATA GAGGAGTACC GCACCATAAT CGGAAACGAG 
GTGGACGAGA TAAAAAAACT TGCAGAACCT CTTAAAGGAA AAAAGGTTCT TCACGTCAAT
GCGACTGCCT ACGGTGGAGG AGTTGCCGAA ATCCTCCACA ATCTCGTTCC GCTTATGAGA
TCGGTTGGTC TGGACGCCAG GTGGAGGGTC ATAGAGGCAC CCGATGAGTT TTTCAACGTC
ACAAAAAAGT TTCACAACAC GCTTCAAGGT GCTGATATAG AGATTTCAGA GGAAGAGTGG
AACCTTTACG AAGAGGTCTG CAGAAAAAAC GCAGAACTGA TCCAGGACGA AGAGTTATTC
GTGATCCACG ATCCCCAACC AGCAGCTCTG AGAAAATTCG TGGATTTGAA CGACAGAAAG
TGGATCTGGA GATGTCATAT AGATCTATCC ACTCCAAACA TGAAGGTCTG GCAGAGATTT
TCCCAGTATT TGGAGGGATA CGACAGACTT GTTTTCCATC TCGAGGAGTA TTTCCCGCAG
GGATGGAAAG AAAGGAGCAT AGCTTTCCCA CCGAGTATAG ATCCCCTGAG TGAAAAGAAT
CGAGATCTTG ATGAAGACAC AATAAGAAAA ACTCTCGAAA GACTCGAAAT AGACCCGGAA
AGGCCTCTGA TAACTGTTGT GTCTCGATTT GATCCATGGA AAGATCTTTT CAGTGCCATC
GACGTCTATA GACTGGTGAA GAAAGAGATC CCGGAGGTTC AGCTTGCCGT AGTTTCCGCC
ATGGCAACGG ACGATCCGGA GGGATGGTTC TTCTTTGAAA AGGTCCTCAG ATACGCCGGA
ACGGACGAAG ATATAAAATT CTGCACGAAC CTGAAAGGTG TTGGAAACAA GGAAGTGAAC
GCTATTCAGA GGGCCACGAC TGTCGCTCTG CACACGGCAA CAAGAGAAGG CTTCGGTCTC
GTCATAAGTG AAGCACTTTA CAAGAGAGTT CCGGTCGTAG CAAGGCCAGT TGGTGGTGTT
AAGATACAGG TGAAACATGG AGAAAATGGT TATTTGGCAT GGGAAAGAGA GGACCTTGCA
GGATACGTGG TAAAACTCAT AAGAGATGAA GAACTCAGAA GAAAAATGGG AGAAAAAGGA
AGGCAAACTG TGGTGGAGAA TTTCATTATC ACGGTGCATC TGAAGAACTA TCTGAAACTC
TTCTCAGATC TGTTGAGGTG A
 
Protein sequence
MDVVLRERNI EEYRTIIGNE VDEIKKLAEP LKGKKVLHVN ATAYGGGVAE ILHNLVPLMR 
SVGLDARWRV IEAPDEFFNV TKKFHNTLQG ADIEISEEEW NLYEEVCRKN AELIQDEELF
VIHDPQPAAL RKFVDLNDRK WIWRCHIDLS TPNMKVWQRF SQYLEGYDRL VFHLEEYFPQ
GWKERSIAFP PSIDPLSEKN RDLDEDTIRK TLERLEIDPE RPLITVVSRF DPWKDLFSAI
DVYRLVKKEI PEVQLAVVSA MATDDPEGWF FFEKVLRYAG TDEDIKFCTN LKGVGNKEVN
AIQRATTVAL HTATREGFGL VISEALYKRV PVVARPVGGV KIQVKHGENG YLAWEREDLA
GYVVKLIRDE ELRRKMGEKG RQTVVENFII TVHLKNYLKL FSDLLR