Gene Tpet_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0516 
Symbol 
ID5171069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp510376 
End bp510885 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content47% 
IMG OID640563023 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_001244114 
Protein GI148269654 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000285737 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGACA GGCTGGAGGA ATACCTGAAC AATCTGAAAA TAGAGAAGAA ACCGGATAGT 
AGAGAATCCT GGGACTCCTA CTTCATGAGG ATTGCCAGGA TGGTTAGTGA GCGATCGACC 
TGTGTTCACA GAAAAGTGGG AGCTGTGATT GTGAAAGATC ACAGAATCCT CGCCACCGGA 
TACAACCAGC CTCCCTCGAA ATTTCCCCAC TGCAACGAAA TCGGATGTAT CCGCGATGAC 
CTTGAAATAA ATTCTGGAGA ACACCAGGAG ATATGCTACG CGCTACACGC GGAGCAGAAC 
GCATTGATGC AAGCGGCAAA GTTCGGTATA GCGGTCAACG GTGCTACCAT ATATGTCACG 
CACAAACCGT GTTCAATCTG TGCAAGACTC ATAGTTAACG CTGGAATAAA GAGAGTCGTT 
TACGAGAAGG ATTATCCTGA TCCTCTGACA GATTTCTTCT TCAAGTTCAC GGGAGTGGAA 
AGTGTTCGCT TTGTAGGTGA TGAGATGTGA
 
Protein sequence
MKDRLEEYLN NLKIEKKPDS RESWDSYFMR IARMVSERST CVHRKVGAVI VKDHRILATG 
YNQPPSKFPH CNEIGCIRDD LEINSGEHQE ICYALHAEQN ALMQAAKFGI AVNGATIYVT 
HKPCSICARL IVNAGIKRVV YEKDYPDPLT DFFFKFTGVE SVRFVGDEM