| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0500 |
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| Symbol | |
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| ID | 5170924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 495789 |
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| End bp | 496868 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563007 |
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| Product | ABC transporter related |
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| Protein accession | YP_001244098 |
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| Protein GI | 148269638 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0026096 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGTA TCAGGGTTGT GAATCTGAAA AAGTACTTCG GAAAAGTGAA AGCAGTAGAT
GGCGTGAGCT TCGAGGTGAA GGATGGAGAG TTCGTGGCGC TGCTTGGTCC ATCCGGTTGC
GGCAAAACCA CCACTCTCTT GACGCTCGCG GGTATTTACA GACCCACCGC GGGAGAGATC
TACTTCGATG ACGTGCTGGT CAACGATATC CCTCCGAAGT ACAGAGAGGT GGGGATGGTC
TTTCAGAACT ACGCGCTCTA TCCACACATG ACCGTCTTCG AAAACATCGC CTTCCCCCTG
AAAGCGAGAA AACTCCCGAA GGATGAAATA GAAAAGAGGG TCTTGGAGAT CGCCAGGAAA
CTCCTCATCG ACAACCTTCT CGATCGAAAG CCGTCACAGC TTTCCGGAGG ACAACAGCAA
AGAGTGGCGC TCGCAAGGGC TCTGGTGAAA CAACCAAAGG TGCTCCTTTT TGATGAACCG
CTGTCAAACC TGGATGCAAA CCTCAGGATG ATCATGCGGG CGGAAATAAA ACACCTTCAG
CAGGAACTTG GAATCACCTC TGTTTACGTC ACACACGATC AAGCTGAGGC GATGACGATG
GCTTCAAGAA TCGCTGTTTT CAATCAGGGG AAACTCGTTC AGTATGGAAC ACCCGATGAG
GTTTATGACT CTCCAAAGAA CATGTTTGTC GCTTCGTTCA TAGGGAATCC TCCAACGAAC
TTCCTGAGGG ATTTCTCTGT CTCCGTGGAA AACAAACAAA CAATTTTGAA AAGAGACGAT
GTCATCATTA AACTGCCAGA GCCAGTTGAT GTAAAATTGA AGGAAGTCGT TGTCGGCATT
AGACCTGAGC ACTGCAGGAT TTCCTGCGAG CGTGTGGAAA ACTCAATTCC CGGTGTTGTC
TATGTTGTAG AACCATTGGG AAGGGATATA ATAGTGAACG TGAAAACGGA GAAAGGAGAG
ATAATAAAGG TCTTCGGCGA CACTGGAAAA GCTCCACAAC CGGGTGAGAA TGTATTTCTG
GTTCCTGATC TCGGGAGGAT TCATCTGTTT AATCCAGAAA CGGAGGAAAC GATTCTGTAA
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| Protein sequence | MPSIRVVNLK KYFGKVKAVD GVSFEVKDGE FVALLGPSGC GKTTTLLTLA GIYRPTAGEI
YFDDVLVNDI PPKYREVGMV FQNYALYPHM TVFENIAFPL KARKLPKDEI EKRVLEIARK
LLIDNLLDRK PSQLSGGQQQ RVALARALVK QPKVLLFDEP LSNLDANLRM IMRAEIKHLQ
QELGITSVYV THDQAEAMTM ASRIAVFNQG KLVQYGTPDE VYDSPKNMFV ASFIGNPPTN
FLRDFSVSVE NKQTILKRDD VIIKLPEPVD VKLKEVVVGI RPEHCRISCE RVENSIPGVV
YVVEPLGRDI IVNVKTEKGE IIKVFGDTGK APQPGENVFL VPDLGRIHLF NPETEETIL
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