Gene Tpet_0474 details

Gene Information

• Locus tag: Tpet_0474
• ID: 5171328
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 465826
• End bp: 466341
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640562983
• Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
• Protein accession: YP_001244074
• Protein GI: 148269614
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
• TIGRFAM ID: [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCAAGGG TAGGAATCAT CATGGGAAGT GACTCCGATC TTCCTGTAAT GAAGCAGGCA 
GCTGAAATTT TGGAAGAATT CGGAATAGAT TACGAGATTA CGATCGTTTC TGCCCACAGG 
ACACCGGATC GCATGTTCGA GTACGCAAAG AACGCCGAAG AACGGGGAAT AGAAGTGATC 
ATTGCGGGAG CGGGAGGAGC AGCTCACCTC CCGGGAATGG TGGCAAGCAT CACCCACCTT 
CCTGTGATAG GTGTTCCCGT GAAAACATCC ACACTGAACG GTCTGGATTC ACTTTTCTCC 
ATAGTTCAGA TGCCAGGGGG TGTGCCCGTT GCCACCGTTG CCATAAACAA CGCGAAGAAC 
GCGGGAATCC TCGCTGCGTC TATTCTGGGA ATCAAATATC CGGAGATCGC AAGGAAGGTA 
AAAGAGTATA AAGAAAGAAT GAAACGGGAA GTTCTGGAAA AAGCCCAAAG ATTAGAACAA 
ATTGGTTACA AAGAATATCT GAACCAGAAA GAGTAA 

 

Protein sequence

MPRVGIIMGS DSDLPVMKQA AEILEEFGID YEITIVSAHR TPDRMFEYAK NAEERGIEVI 
IAGAGGAAHL PGMVASITHL PVIGVPVKTS TLNGLDSLFS IVQMPGGVPV ATVAINNAKN 
AGILAASILG IKYPEIARKV KEYKERMKRE VLEKAQRLEQ IGYKEYLNQK E