| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0454 |
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| Symbol | |
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| ID | 5169969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 440121 |
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| End bp | 440882 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640562958 |
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| Product | hypothetical protein |
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| Protein accession | YP_001244054 |
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| Protein GI | 148269594 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.588948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGGTC ACAACAAGTG GGCCAATATT AAACACAGGA AGATGGCCCA GGATGCGAAG
AAATCCAAAA TTTTCACAAA GCTGATCAGA GAAATCATAG TTGCAGCAAG AGAAGGAGGA
GGAAACATAG AAACAAATCC GCGATTGAGA GCGGCAGTTG AAAAAGCACG GGCAGAAAAC
ATGCCCAAAG AAAACATTGA AAGAGCCATA AAGAGAGGAA CGGGAGAACT CGAAGGTGTA
GATTACCAGG AAGTGATCTA CGAAGGATAC GCACCCGGAG GAGTCGCCGT GTACATCAGA
GCGCTCACAG ACAACAAGAA CAGAACCGCT CAGGAGCTCA GGCACCTGTT CAACAAATAC
GGTGGCAGTC TTGCAGAGAG CGGCTCGGTG AGCTGGATAT TCGAAAGAAA AGGAGTTATC
GAGATCCCAA GAGACAAGGT GAAAGATCTG GAAGAACTCA TGATGATCGC TATAGACGCC
GGTGCGGAAG ACATAAAAGA CACAGAAGAT CCGATACAGA TAATTACAAC CCCTGAGAAT
CTTTCGGAAG TGAAGAGCAA GCTGGAGGAA GCCGGCTATG AGGTGGAAGC AAAGGTAACA
TTCATTCCAA AGAACACGAT GAAAGTCACA GGTAAAGATG CCGAAAAAGT CCTCGAATTT
CTCAACGCAC TGGAAGATAT GGACGACGTG CAGGAAGTGT ATTCGAACTT TGAAATGGAC
GACAAAGAGA TGGAGGAGAT ACTTTCCAGA CTGGAAGGAT AA
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| Protein sequence | MSGHNKWANI KHRKMAQDAK KSKIFTKLIR EIIVAAREGG GNIETNPRLR AAVEKARAEN
MPKENIERAI KRGTGELEGV DYQEVIYEGY APGGVAVYIR ALTDNKNRTA QELRHLFNKY
GGSLAESGSV SWIFERKGVI EIPRDKVKDL EELMMIAIDA GAEDIKDTED PIQIITTPEN
LSEVKSKLEE AGYEVEAKVT FIPKNTMKVT GKDAEKVLEF LNALEDMDDV QEVYSNFEMD
DKEMEEILSR LEG
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