Gene Tpet_0448 details

Gene Information

• Locus tag: Tpet_0448
• ID: 5171238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 435618
• End bp: 436184
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640562952
• Product: glutamine amidotransferase subunit PdxT
• Protein accession: YP_001244048
• Protein GI: 148269588
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000803094
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAG GTGTTCTGGG TGTTCAGGGA GATGTCAGAG AACACGTGGA AGCTCTCCAC 
AAGCTCGGAG TTGAGACTCT GATAGTGAAA CTTCCAGAGC AGCTGGACAT GGTGGATGGT 
CTCATCCTGC CTGGTGGAGA ATCGACCACC ATGATAAGAA TTCTCAAAGA GATGGATATG 
GATGAAAAGT TGGTGGAAAG AATAAACGAA GGATTACCAG TCTTTGCAAC GTGTGCCGGT 
GTGATCCTTC TCGCAAAGCG CATCGAAAAC TACTCCCAGG AAAAACTTGG AGTTTTGGAC 
ATAACCGTTG AAAGAAACGC CTACGGAAGA CAGGTCGAAA GCTTTGAGAC GTTTGTAGAG 
ATACCCGCTG TAGGAAAAGA TCCATTCAGA GCCATTTTCA TAAGGGCTCC AAAAATTGTT 
GAAACAGGAA AGAATGTGGA AATTCTGGCA ACCTACGACT ACGATCCTGT TCTGGTGAAA 
GAAGGAAATA TACTCGCGTG CACGTTTCAC CCAGAACTCA CCGACGATTT GAGACTGCAC 
AGATACTTCC TGGAGATGGT GAAATGA 

 

Protein sequence

MKIGVLGVQG DVREHVEALH KLGVETLIVK LPEQLDMVDG LILPGGESTT MIRILKEMDM 
DEKLVERINE GLPVFATCAG VILLAKRIEN YSQEKLGVLD ITVERNAYGR QVESFETFVE 
IPAVGKDPFR AIFIRAPKIV ETGKNVEILA TYDYDPVLVK EGNILACTFH PELTDDLRLH 
RYFLEMVK