| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0447 |
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| Symbol | |
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| ID | 5170757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 434733 |
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| End bp | 435614 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640562951 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001244047 |
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| Protein GI | 148269587 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000669872 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA AAAAGGGTAC CTGGATCATA AAGAAGGGTT TTGCGGAGAT GTTCAAAGGC
GGTGTCATCA TGGACGTCAC CTCTGCTGAA CAGGCCAAGA TCGCAGAAGA AGCGGGAGCC
GTTGCGGTAA TGGCCCTCGA AAGAGTTCCG GCCGATATCA GAAAAGAGGG CGGAGTCGCC
AGAATGGCAA GCATCGCAAA GATCAGGGAA ATCATGGAAG CAGTGTCCAT CCCTGTGATG
GCGAAGGTGA GAATCGGACA CATAGCCGAG GCAAAGATAC TGGAAGAACT CGGAGTCGAT
TTCATCGATG AGTCTGAGGT ACTCACACCA GCTGACGACA GGTTCCACAT CAACAAACAC
GAATTCAAAG TACCTTTTGT CTGCGGTGCA AGAGATCTTG GAGAGGCTCT CAGAAGAATA
GCGGAAGGCG CCGCTATGAT CAGAACGAAG GGAGAGGCTG GAACGGGAAA CGTCGTGGAA
GCGGTGAAGC ACATGCGAAG GATGATGGAA CAGATAAAAC AGGTGACCAA GATGGAAGAC
GAAGAACTCG TCGCTTACGG AAAAGAAATA GGAGCTCCCG TGGAGCTTCT CAGGGAGGTC
AAAAGACTTG GAAGACTTCC CGTCGTGAAC TTCGCAGCGG GTGGTGTGGC AACTCCTGCG
GATGCGGCTC TCATGATGAT GCTCGGAGCA GATGGAGTGT TTGTAGGATC CGGTATCTTC
AAATCCAAGG ATCCAAGAAA GATGGCGAAA GCCATGGTGC TGGCCGTTAC CTACTGGGAC
AATCCAAGGA TACTCCTCAA GATCTCCGAA GACATAGGAG AGCCGATGAG AGGGCTCGAT
GTCGAAGAAC TCGAAGTGAG AATGCAGGAG AGAGGGTGGT AA
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| Protein sequence | MEIKKGTWII KKGFAEMFKG GVIMDVTSAE QAKIAEEAGA VAVMALERVP ADIRKEGGVA
RMASIAKIRE IMEAVSIPVM AKVRIGHIAE AKILEELGVD FIDESEVLTP ADDRFHINKH
EFKVPFVCGA RDLGEALRRI AEGAAMIRTK GEAGTGNVVE AVKHMRRMME QIKQVTKMED
EELVAYGKEI GAPVELLREV KRLGRLPVVN FAAGGVATPA DAALMMMLGA DGVFVGSGIF
KSKDPRKMAK AMVLAVTYWD NPRILLKISE DIGEPMRGLD VEELEVRMQE RGW
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