Gene Tpet_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0446 
Symbol 
ID5170351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp433424 
End bp434719 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content50% 
IMG OID640562950 
Productnicotinic acid phosphoribosyltransferase-like protein 
Protein accessionYP_001244046 
Protein GI148269586 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000943428 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGAC TCAGTCCCGA GGTCTTCAAG GTTCCCATCG ACCGCATCAG GAACGGTTAC 
TACTCGGACA TATACTTCAT AAACTATGTG AAGGTCTTGA AAAGGGACAA CCGCCATCCA
CGGGTGTACT ATCAGTTCTT TCCGAGGAAA GACGCCGTAA TCTGCGGAAT TGACGAGGCC
CTCGCCATTC TGAAGTTCTG CACGGGATAC TACAAAGACG AGGAAAAAGC GAGGGAACTC
TTCGAAGAGA TCTTGAAATT AGACAAAGAA ATGCAGGCTG CTTCAGTTGA AATGGACGTT
CAGAAGATTC TGGAGCTCAC TCAGAAAAAG TGGGACCTCA GATTGAAACT GAACGATCTT
TGGGTAGACA AATGGGATGA GATAGAAGTA CACGCCCTCT ACGACGGCGA GGAAGCGAAA
GAAGGAGAGC CGATAATGAC AATAGAGGGA GATCCCACCT ATTTCGGGTA TCTCGAAACG
GTGCTTCTCG GTGTGATCGC AAGAGCCACC AGCACGGCAA CGGCCGTCAA GAAAGTGGTG
AAGGCAGCGA GAGGAAAACC CGTGCTCTTT TTCAGTGCCC GTTTTGATCA CTACTGGGTC
CAGGCAACGG ACGGCTACGC AGCTCTCAAA GCGGGGGCCT TTGGAGTTTC TACAGACGCG
AACGCGGACT ACTGGGGTGT CAAATCCATG GGAACGATGC CTCACGCCCT GATAGCCTGC
TACGATGGGA AGACCGAGGA CGCTGCCATC GCGTTCGATA TGCACATGGA GGAAGACGTG
AACAGGATCA TTCTTGTGGA CTGGGACAAC GATGTGATAG GAACAACCTT CAAGGTCATC
GAAAAGTTCT ACGAGTACGT GATGAAAAAG CCGTTCAAAC TCGGAGTGAC AGATCCTTCA
CCGATCATAG GTCCTGGAAA GAACAAGATA TGGGGTGTGA GGTTCGACAC CTCCGGGAAT
CTAAGAGATA AATCCGTGGT ACCAAAGGAC GAGTCTTCCT TTGGGGTGTG TCCGGAACTC
GTCTGGAGAG CCCGTCAGGA GTTCGACAAA GTGGGGCTCA AGGATCTGAA GATAGTCGTC
TCCGGAGGAT TCGACGAGAA GAAGATAGAT CTCTTCGAAA GACTCGGAGT TCCTGCAGAT
GCTTATGGTG TTGGATCTCG CCTGCTGAGG GAGAAGGTGG ATATCACGGC AGACATCGTT
GAAGTCAATG GAAGACACTG CGCAAAGGTG GGAAGGTACA AGATAGAAAA CCCCAGACTG
AAAAAAGTGG AGAAGCGCTA CTGGGAAGAA GAGTGA
 
Protein sequence
MKRLSPEVFK VPIDRIRNGY YSDIYFINYV KVLKRDNRHP RVYYQFFPRK DAVICGIDEA 
LAILKFCTGY YKDEEKAREL FEEILKLDKE MQAASVEMDV QKILELTQKK WDLRLKLNDL
WVDKWDEIEV HALYDGEEAK EGEPIMTIEG DPTYFGYLET VLLGVIARAT STATAVKKVV
KAARGKPVLF FSARFDHYWV QATDGYAALK AGAFGVSTDA NADYWGVKSM GTMPHALIAC
YDGKTEDAAI AFDMHMEEDV NRIILVDWDN DVIGTTFKVI EKFYEYVMKK PFKLGVTDPS
PIIGPGKNKI WGVRFDTSGN LRDKSVVPKD ESSFGVCPEL VWRARQEFDK VGLKDLKIVV
SGGFDEKKID LFERLGVPAD AYGVGSRLLR EKVDITADIV EVNGRHCAKV GRYKIENPRL
KKVEKRYWEE E